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12-5030-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22485982 [Map]; Strand: c
      • AT1G61050.1 - [+] show detail - alpha 1,4-glycosyltransferase family protein
        Distance: -754; Region: promoter
    Flanking Genome Sequence: 12-5030-1 - 5-prime edge 
    ATGATGATTG CATAATCACT AACTTCTACA AAACCAAACT AATATTGAAC 
    TGTTAATTAG CTCATAACTA AATTCATCTA ATTAAGAGTA GCAAAACTGC 
    AAAAGACTTG ATTTTCTAAT TTCATGCAGT CATACACTAA TCAGGAGAGT 
    TCACACAAAA ACGAGTACAA AAATATTTCA AGAAAAAACA AACTGATCTA 
    AACATATTTT GTGGAGTACA AAAGAAAGAT ATGAAGAAAA GAAGAACCAA 
    GAAGCAGTTT TCAGAAGATA ATGAAACACT GAGACTTGAA AAAAATGCAA 
    ATAAATCAGA GAAGACCTCT CCTTCTCTTG TAATCACTAA CAGTTAACGT 
    AAGGCCATGT CTCTTGCCAT CGTTCTCTGC GACTCTGCAT CCCACAGTTG 
    CTTCGGTCAG TTGCTTCCTC GCCATGAACG CTTTCTGTAC TCCTTGAGGT 
    CCTCCGTACT TCTGTAAAGC CGTTAGCGAT AACGACAATT CAAAGTTATG 
    AAGCTGATTG TGTTCTGCTC CTTGACCTAT TGGAGCTCTT GTGTCTATTA 
    GCTTTCCTGC CTCTGCAGCT GCTTCTAAAG CTGCTTCTGT CGCTNCAACA 
    CCTGNTCCTG CATNTGCTCC ATGGTCTCAA CCCGCTGCTG CACCCGNTGC 
    CTNGTTCTCT TNTTCCATNN TTTCCCCTTG NTTTTCCGGT GGT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22485999 [Map]; Strand: c
      • AT1G61050.1 - [+] show detail - alpha 1,4-glycosyltransferase family protein
        Distance: -737; Region: promoter
    Flanking Genome Sequence: 12-5030-1 - 3-prime edge 
    AAGNGGGGGG GGGNGGGGNN TGNGGGTNNG TGNNNNAGNA NGTTNNNNNN 
    TTTNAAGNGA CGAGGTTTTT TCGACCGTTA CNNCCCGTNN TNATCCCTAN 
    TCANNATGCA CGANTATGGA TCGNNGGCTA NGAAAACAGA TGAATNGTAA 
    CNCAANAGAN AGAGAAGTGN NGACNAATTA ATAAANTGAN ANCNCTGNCN 
    NNATAANGCA AATATATTNT ATAAGAANAA AATCTGNNTN ATNTNAATNA 
    TTTATNATAC AAAAAAANAT ACCANGNGAG TNTNAAAANA CATNNCANCC 
    ACCAACCTTA TTATNGCNTA TGGNGAGTCA ATAATNANNG NCNCAANNGC 
    TNAAGAAACC NATNAAAGAN NNNGNNATGC NGGGAAACNA CCCGNTGGCA 
    TNTGNTNCCA NGGAAGGAAN ACNTATAAGG GGAANAATAN TTNNNCNAAC 
    NNGGACCNGG NCTGATNCGT TNCTCNGAGA NNACNNGGCC ATGCGANAAC 
    GCNCNGANNG GNNNCCTANC NNGACNTTAT GNANCNNACN ATAGCNNTAT 
    AACACNAANN NGACAACCNA NAAAGAAGAC GGTCCGTTAA NTGNANNCGA 
    CTNNGNNTGN TATNCACAGT TNTNCCNTAN ACNNNACCNT GCTCGNATAA 
    TGNATAGTNA GNNTANNAGA NACNANANGN NACNNGGNCG NGNANTNCNN 
    NTCNCTGNNT GAGGNAAGCA NCACGGANGN ACTNNNANTN NACNTGCCNA 
    CTNNACNNTC NGGTGAAGAN AAGNAGNNNA NANNGNNNNC ANAAANAANN 
    AGCNCNGGGA GANNNGNNAA NNCNNGCGGN GAGNGAANNA AANCNNNNGC 
    AAGNAAGNNN GGCACAGNNG A

AT1G61050.1

Model type
Protein coding
Short Description
alpha 1,4-glycosyltransferase family protein
Computational Description
alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 493 Blast hits to 489 proteins in 121 species: Archae - 2; Bacteria - 96; Metazoa - 240; Fungi - 20; Plants - 92; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR