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12-5099-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 19373 [Map]; Strand: c
      • AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 12-5099-1 - 5-prime edge 
    GACATGAGAG ACATTTGTAG TTGTTGTTGT TGCTGCATGG CCATAGGAAG 
    CATCATAGAA GGCATATTCA TTCTGCTCAT CATGCTCACT TGTGCTTGAA 
    GTTGCTTCAA ATACTCTATC ACTTCATCCA ACATAGATGC TTTATCCGTC 
    TATAGTTCCA AAATTAACGA TTTATATATC AAGCCTCTTT GGTATCTACT 
    ATAATTAACC AAACCAATGT TACGGAGCAT GTGTGTAATG TAGATTGTGT 
    TGATTTTTGA GTCGACAGCC ACAAGGCATA TAATAATTAA AGGTGTATAT 
    GAA

AT4G00050.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR