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12-5154-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22706307 [Map]; Strand: w
      • AT1G61550.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-5154-1 - 5-prime edge 
    CCTCCATGCA CCTTGTAAAG AAACCTTCGA TACAATTGCT GATTAGAGTT 
    TCAAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22706243 [Map]; Strand: w
      • AT1G61550.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-5154-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGCATGGAGG AATGATTTGA AATCAGAAGA TGTCTCAGGT TTATATTTCT 
    TTGAGATGAA GACCATTGAA ATTGCCACCA ATAATTTCAG TCCCGTAAAC 
    AAACTCGGAC AAGGTGGATT TGGTCCAGTT TACAAGGTCA GATAATTTTT 
    ATTCTCTCTA TTCATTTTAT CTCAAGAAAT TTATAGCAAT GTCTTTACCT 
    TATTCAATCT GTCTCAGGGA AAGTTACAAG ATGGGAAAGA AATAGCTGTA 
    AAACGGCTTT CCAGCAGCTC TGGACAGGGA AAGGAGGAGT TCATGAATGA 
    AATACTACTC ATCTCAAAAC TCCAACACAT AAACTTGGTT CGGATTTTAG 
    GATGTTGCAT TGAAGGAGAA GAGCGACTGT TGGTTTATGA GTTCATGGTG 
    AACAAAAGCC TTGATACTTT TATCTTTGGT GGGTTCTCTT TCCTTTTCTA 
    TTAGCAGCTT TTCTCTATAG AACTGTTTTT TATATAGATT TCACAATGTA 
    TAGATTCAAG AAAAAGGGTT GAGATTGATT GGCCTAAGAG GTTCAGTATT 
    ATTCAAGGAA TTGCGCGTGG TCTTCTCTAT CTCCACCGTG ACTCACGCCT 
    CAGGATAATT CACCGAGATG TGAAGGTTAG CAATATTCTT CTTGACGATA 
    AAATGAACCC GAAATATCAN ATTTTGGATT GGCTCGGATG TTGAAGGACC 
    CAAATNTCAG G

AT1G61550.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61490.1); Has 121113 Blast hits to 119449 proteins in 4468 species: Archae - 96; Bacteria - 13448; Metazoa - 44854; Fungi - 10099; Plants - 34551; Viruses - 435; Other Eukaryotes - 17630 (source: NCBI BLink).
Link
InterPro Scan - TAIR