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12-5252-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24034762 [Map]; Strand: w
      • AT1G64670.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: -1206; Region: intergenic
      • AT1G64680.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1259; Region: intergenic
    Flanking Genome Sequence: 12-5252-1 - 5-prime edge
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGT CCCCCTCAAG TCAAGCCTTC TATATTCATT
    TTCTGTCATT GTATGTACTC TTCTTGCAAC CTTTTCATAT GTATCACTAT
    AATTTGTTTT TTCCTCTTGA AGACTTGAAC AATCTGGTGG AGCACCAGAA
    GATTCACTAA CAGCCAAGTA TTTTTTTGAT ATCATTCATA AGTTTTAGGG
    TAATGGAGTG AAATTAGCTA GAGGAATTTA GTCTAAAGCT CAAACTGCGA
    CCACCCGATG GAGTTGTTTT GGTAGAGCAG AAAAATAAGT TGAAATGTAA
    GAAAGAGAAT TAGTTACAAC TGTAAGTTAC AAGTAATGAC ACAATTGTAA
    TGCAGAGGTC AACGACGACT GACATACATA TAAGTGCACT CCATTCCAAC
    ATGTAGTAGC ATTCGAATTG GTTTTGGACT GACAAAATTG AGTAACTACA
    ACAAATAATA ATAATAATAA TAAAAGTATG TGACGGAAAA AAAAAGTCAA
    AAGACCTTAA ATGCGTANTT GATGGAGGTT GGTAGGGAGT GTCTTTAATT
    TATAGTTTTA CATATTTTGA AACTTGAAAA GNGCTCCTNT CCTCTTTGAT
    TNATCCCCTA CTNGCTATTA TTTTACTCAT CCNCGTTACC ATNTNAATGT
    ANTGACNCTC GGNNTATGAT TNGGCCNTNG ACNTGNNTAC ANNTNGAAAA
    ANGGCAAAAC AAGTTNANCT ANG
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24034757 [Map]; Strand: w
      • AT1G64670.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: -1201; Region: intergenic
      • AT1G64680.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1264; Region: intergenic
    Flanking Genome Sequence: 12-5252-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGA 
    CTATATATAT CTGTCTCCAT CAGTAGCTTG TCGTATCTAT ACTACATACC
    GGGATCTAGT TAGAATCAAG CCACTCGTTT GGTTAAGTAT TATTAAAAAT
    AAGCTCTCAG GCCCTCTTTA AGATTGTGTG ACGCAAGACT TTTGAAAACC
    TATTAAACAT AGCACATGGT CTCACGTTCC TTACCATACT ACTATATATG
    TATATCACTC TTTTTTCATA AAAGCACACT CGAATATTTC TACTTCATTA
    ATATTTTCAC CCTAACAGAT TAGAGAGAAT GGTATGTTGA GTAAAGAGAT
    GCGATTAGCT GTTGCTTGAT GCCACGCACA CGTCCTTGTC CTCATGAAAT
    ATTACCAATA CTACTATCTA TATATGGATA CTGACAGACT AACTCTTTTA
    ACTCCTGTTT T

AT1G64670.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Curator Summary
Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself.
Computational Description
BODYGUARD1 (BDG1); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G41900.1); Has 7923 Blast hits to 7922 proteins in 1350 species: Archae - 58; Bacteria - 5093; Metazoa - 308; Fungi - 248; Plants - 246; Viruses - 4; Other Eukaryotes - 1966 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G64680.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR