Home
Mutant Lines
12-5254-1

12-5254-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 11517581 [Map]; Strand: c
- AT2G26980.1 - [+] show detail - CBL-interacting protein kinase 3
  Distance: 0; Region: exon4 (CDS)
- AT2G26980.2 - [+] show detail - CBL-interacting protein kinase 3
  Distance: 0; Region: exon4 (CDS)
- AT2G26980.3 - [+] show detail - CBL-interacting protein kinase 3
  Distance: 0; Region: exon5 (CDS)
- AT2G26980.4 - [+] show detail - CBL-interacting protein kinase 3
  Distance: 0; Region: exon5 (CDS)
- AT2G26980.5 - [+] show detail - CBL-interacting protein kinase 3
  Distance: 0; Region: exon4 (CDS)

ATTATAGTTG TGAAATCGGA TAGTGATAAC TTATGAATGA AGGTAAATGA 
TGGGCGGATG AAAGAAGATG AGGCGCGGAG ATATTTCCAA CAGCTTATTC 
ATGCTGTTGA CTACNTGTCA TAGTAGAGGT GTCTACCATA GAGACCTCAA 
GGTACATACA TTGTTTTTAT AGATGGTAGG ACTGAAACAT GGTATATTGA 
TAGAGAAGTT ACCTATGCAT ATATTATGTG CAGTAATTGA CTATTGTAAT 
GTGATTTTGC AGCCTGAAAA TTTACTATTG GATGCCTATG GAAACCTCAA 
GATCTCAGAT TTTGGATTAA GTGCTTTGTC CCAACAAGTC AGGGTAATGA 
CCATCTGTTT CCATAAGTAT TTTACTGTTC CAAGAAGTGG TTTCAATTTT 
TCCTAAAAAC TTACGGATTT TGTTGTCAAA AATTATATAC ATATATCTAT 
TCTTAAACAT GGTTTATATG CTTGGGGATA TCAGGATGAT GGACTCTTGC 
ATACATCGTG TGGAACACCA AACTACGTTG CTCCTGAGGT CTGCCTAAAA 
CAAACATGAT TCTTTATATC TTATAATATT ATCCTTTCAT TTTACGTCTT 
TATAACCGAC ATCTTTGCGG GTTTTAGGTT CTCAATGATA GAGGCTTTGA 
TGGAGCAACA GCTGACATGT GGCATGCGGG GTTGGACTCT NTGTCCTGCT 
TGCAGG

AT2G26980.1

Model type: Protein coding
Short Description: CBL-interacting protein kinase 3
Curator Summary: encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.
Computational Description: CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 131630 Blast hits to 129396 proteins in 4338 species: Archae - 194; Bacteria - 15541; Metazoa - 48417; Fungi - 13320; Plants - 31914; Viruses - 527; Other Eukaryotes - 21717 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G26980.2

Model type: Protein coding
Short Description: CBL-interacting protein kinase 3
Curator Summary: encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.
Computational Description: CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 131035 Blast hits to 128804 proteins in 4263 species: Archae - 194; Bacteria - 15260; Metazoa - 48258; Fungi - 13319; Plants - 31760; Viruses - 527; Other Eukaryotes - 21717 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G26980.3

Model type: Protein coding
Short Description: CBL-interacting protein kinase 3
Curator Summary: encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.
Computational Description: CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), CBL-interacting protein kinase (InterPro:IPR020660), NAF domain (InterPro:IPR004041), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 131082 Blast hits to 128848 proteins in 4264 species: Archae - 194; Bacteria - 15260; Metazoa - 48285; Fungi - 13319; Plants - 31784; Viruses - 527; Other Eukaryotes - 21713 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G26980.4

Model type: Protein coding
Short Description: CBL-interacting protein kinase 3
Curator Summary: encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.
Computational Description: CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), CBL-interacting protein kinase (InterPro:IPR020660), NAF domain (InterPro:IPR004041), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 132116 Blast hits to 129872 proteins in 4353 species: Archae - 194; Bacteria - 15566; Metazoa - 48305; Fungi - 13626; Plants - 31846; Viruses - 527; Other Eukaryotes - 22052 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G26980.5

Model type: Protein coding
Short Description: CBL-interacting protein kinase 3
Curator Summary: encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.
Computational Description: CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR