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12-5280-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • desaturated green (PATO:0001272)
    (Leaves::pale green)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28174771 [Map]; Strand: w
      • AT1G75030.1 - [+] show detail - thaumatin-like protein 3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-5280-1 - 3-prime edge 
    GCCGCCGGTA CATTTTAAAA CGCCGCCGCA GTCTCCGGTG ACGCAGGTAC 
    CGTGACCGGA GGCGTCAAAG TTGCAGCCGG TACGAGCCCA GAACCGGCCT 
    GACCAACCGG TAGGAGCCGT GAGCTGCACG GAAGCGCCTG GAGTTAAGGG 
    AAATCCGCCG TCGCCGAGGG TGATGCTGTT GCCGGAGAGA GTTCCCGGCC 
    AAACGGTGTA CGCACAACTG TTTTGTAAAG TGAATACGGT GGCGGAATCA 
    GCAATGCCAC CTGCAATTTC AAAAACAGTT AAATACA

AT1G75030.1

Model type
Protein coding
Short Description
thaumatin-like protein 3
Curator Summary
encodes a PR5-like protein
Computational Description
thaumatin-like protein 3 (TLP-3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1604 Blast hits to 1584 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 52; Fungi - 78; Plants - 1423; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR