Home
Mutant Lines
12-5284-1

12-5284-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 16382370 [Map]; Strand: w
  - AT4G34220.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 12-5284-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTA CCGCCAGCAG GTGAAGAAAC AGAGGAGGCT 
GCCATTGGGA ACATAATCGG AAATGAGAAG TTTCTCGTCG TCTCCCCAGC 
AGAACCCACG AATT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 15975728 [Map]; Strand: c
- AT4G33110.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  Distance: -931; Region: promoter
- AT4G33120.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  Distance: 0; Region: exon7 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTATCTCTT 
TTACGGCAAC TATCTCCTTA TCCATTCCTT TCAGCCACTC TTCACTGCAA 
AATGTTGTAT CATAAAAGTA ACAAACATTA CAAGATCATT ATCATCTTCA 
CTTGCTTTTT ACAACAAATT CTTCAGAGTT TTTACCTTGT CTTTGCATAA 
TGCNGTCCCG TTAACGAGCC AATGATCCAT AATCGAAACA TTTTCCTGAA 
CAAACACCAA CATATTGATA TATTTGGATT GATGATAATC TACCGAGTCA 
TACACAAGTT ATAATGTATA TTACTTGGAA ATATAGGAGA AGATCTGCTG 
ATGGCATTGT TCCTCCGCTG AAGAAGTGTC TTGTGATCCA GTCATCGTCA 
TTCACATCCT ATAATGAATC AACACAATCC CAAGATTTAA TTATTACCAA 
GAAAGCATGG TGAAGTAACT GACTAAACAA GAAGCTATCA AATTAGACAT 
TAATTGATCC ACACCTCAAA GTGGTAAGCA TATGTCTTAT GGCAGAGATA 
GTGAACAAAC AGAAGACTAT CTTCCTTCAT CCAGTTTCCT ATCTTCTTCA 
GTAGCTCTCC ATAGTTTTTC ATATGCTAAT CACAATCCCA AGCCAAAGCT 
AAGATATAAA CCTCTGATCT TTGACAGGCA AAAATATAAT GAAATAAAAA 
CCAATCCAAC CTCGAACATT TCGATGGAGA ATATCCGATC GT

AT4G33110.2

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1).
Link: InterPro Scan - TAIR

AT4G33120.1

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33110.2); Has 8479 Blast hits to 8475 proteins in 1584 species: Archae - 50; Bacteria - 4759; Metazoa - 58; Fungi - 355; Plants - 378; Viruses - 0; Other Eukaryotes - 2879 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34220.1

Model type: Protein coding
Short Description: Leucine-rich repeat protein kinase family protein
Computational Description: Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G15300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR