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Mutant Lines
12-5310-1

12-5310-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 36791 [Map]; Strand: w
- AT4G00090.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: 0; Region: exon10 (3UTR)
- AT4G00100.1 - [+] show detail - ribosomal protein S13A
  Distance: -293; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATAACA CTCACAGTCT TCTATGTTTT CCAAATTAAG 
GAAATTTAAA AAGCACACAA CAACACTAAG AAATATGAAT CGATTAAAAT 
TATTATACGC ATTTTGTTTT CTTTGTATCA GAAAAATGAT AGTACTACAT 
ACATATGGTA ATTTGGTAAA TAATACAAAA AGAATCTACA CAACCAAGTG 
AAAAATCAAA AATGTGTCTG GTCGTGGACT CCGATGGGCT TTTTGAGGCA 
AATTGAAAAC TGGGCCAGAA ATATGAAAGG CCCACGTAAG TCCCGAATAT 
AACCTAAAAA GCACACTCTC TAAT

AT4G00090.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: periodic tryptophan protein 2 (TAIR:AT1G15440.2); Has 19942 Blast hits to 11235 proteins in 520 species: Archae - 42; Bacteria - 5638; Metazoa - 5982; Fungi - 4099; Plants - 1742; Viruses - 0; Other Eukaryotes - 2439 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00100.1

Model type: Protein coding
Short Description: ribosomal protein S13A
Curator Summary: Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development
Computational Description: ribosomal protein S13A (RPS13A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation; LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 (TAIR:AT3G60770.1); Has 1100 Blast hits to 1100 proteins in 416 species: Archae - 259; Bacteria - 0; Metazoa - 343; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink).
Link: InterPro Scan - TAIR