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Mutant Lines
12-5339-1

12-5339-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 19877925 [Map]; Strand: w
- AT1G53290.1 - [+] show detail - Galactosyltransferase family protein
  Distance: 4435; Region: intergenic
- AT1G53300.1 - [+] show detail - tetratricopetide-repeat thioredoxin-like 1
  Distance: -1497; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
ATGGTTACTA TTGGTAACAA ATGTTATATT GAAACTTTAA CTTAAATTTA 
AAGTTTCAAA TTATACGGTT AATTTTTGTT GTAAGTTATT ATCTTCAAAA 
GTTTTGACTA TCCAATTTCC ACATAAAATT AACTATGAGT TTTCTAACAT 
TTTTTTAATA TGATATATTT TCAGTCTGGA TTGAAAATTT TAAAAAACCG 
TCGCATAAAT AAAATCAGAT AAAACCGGTT TACATCGATA TACTCTAAAC 
AAATCGATCA AAGATAGTCG ACCAAAAGTT GTTCTCTCAT TCTACCAAAA 
TCAGATCACG ATTCGTCGAA AACCTTTAAT CACCAGAATC AGACTCATCT 
TCAATTCGAT GAAGAGAGTC ACACGACGAT GGATATGCTA AGACCCGCAA 
ACCGCGTACA CAACTCCGCT TTCCTTCTTC CACTCAAAGT ACCATCAACC 
AAATCACATG ACAACTTCCA ATATGGAGCC AAGTCTCAAA AACTAAGGAG 
CCACCCCTAA GTTTTCTAAC ATGCATAATA ATAATAAAAA CTTTTATATG 
CAATAATAAT CAGAAAACAG TAACACTTGG CGACAAAGAT CTATGCATTC 
TCTTGGCCTT TGCAATTTAT TTCTCTTAAA GAGTCTTGTA AATATTTCAA 
CACTAGATAC ACGTTCCGAT ATTAATATGG GATTCCATTC TTAAAATCCG 
GCCATTTTAT CAAGAAAATT AA

AT1G53290.1

Model type: Protein coding
Short Description: Galactosyltransferase family protein
Computational Description: Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G14960.1); Has 1329 Blast hits to 1318 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 702; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G53300.1

Model type: Protein coding
Short Description: tetratricopetide-repeat thioredoxin-like 1
Computational Description: tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink).
Link: InterPro Scan - TAIR