Home
Mutant Lines
12-5395-1

12-5395-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 19876980 [Map]; Strand: c
- AT1G53290.1 - [+] show detail - Galactosyltransferase family protein
  Distance: 3490; Region: intergenic
- AT1G53300.1 - [+] show detail - tetratricopetide-repeat thioredoxin-like 1
  Distance: -2442; Region: intergenic

GGTATACCGA CACTTGCATT GCACAAGTAT TATTGTGTAT TCTTTTTGCT 
TTTTTGGTAT CCATAAAACA ATGTTTTATC AAGCATAGAA TATTTTGTGA 
CCTAAAAAGA AATATATGAT TGTATTATTT CACNTTGACT TTGTGTTATG 
GAGCATAGAA TATACCGAAA TCTTGCGTTA TACTTCATAT CCTTCGAACC 
ACATGTTTTG ATATGCGTAT AGTTTGCAAA TATGCCATTA TGCATAAAAC 
AGATGGTGGT TTCTTTTGGA GCAAGTTAGG TGATTAAAGA AAATAGCTAA 
TACTTAATTC AAAAGCCTCA TTTTTATTTT AATACATATA TTTTCAATTT 
CGTCGACACT TGGGATAAAC ATGAATATTG ATGTCATAAA TTTCCTTTTA 
AAATTTATCT ATTGGCGTGT AAAACTAAAA TTTCTTAAAG TGTAGTTATG 
AATATTCAAC TCGACAATTA AGATGTTGTG TAGTTGTCTT AAACATAATT 
ACCCATTAAT CTGTCGTCAA ATATGAATTG ATTGATGTTG ATTATTGNGT 
ATAACTACTT TATAGGGATG GGAAAAGGCA TATTCNTAAG CTANCANNCN 
GGGCCGNNNA CCACNCNNGC C

AT1G53290.1

Model type: Protein coding
Short Description: Galactosyltransferase family protein
Computational Description: Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G14960.1); Has 1329 Blast hits to 1318 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 702; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G53300.1

Model type: Protein coding
Short Description: tetratricopetide-repeat thioredoxin-like 1
Computational Description: tetratricopetide-repeat thioredoxin-like 1 (TTL1); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 2 (TAIR:AT3G14950.1); Has 32097 Blast hits to 15852 proteins in 1300 species: Archae - 552; Bacteria - 6287; Metazoa - 8110; Fungi - 3609; Plants - 2668; Viruses - 128; Other Eukaryotes - 10743 (source: NCBI BLink).
Link: InterPro Scan - TAIR