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12-5456-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • desaturated green (PATO:0001272)
    (Leaves::pale green)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9507091 [Map]; Strand: c
      • AT5G27010.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-5456-1 - 3-prime edge 
    TGCAGGATGA TGTTTTAAAA GATCTTTGAT ACCATGTAAT GCATCTACAT 
    AGACAAAACC AAAACTGATC ACAAAGTCGC AGGTTTCATA TTTTCATCAA 
    CCAAAAACAT GAGAACACAC CCAAAAAAAG TACCTTTGCG AACTTTAGCA 
    TTGGGATGCC CAGTTCGGTT CTTAAGCTCA AGCAAGGTCA AACCTTTCTT 
    ACTTGTAGCG AAGCCATCTC TTTCTGCTGC CACACTTTGC TCATGAAATA 
    TAATTGCTGC AATAGAAAAC AAAGCAATTT CTCATAGGAA GAAGTTAAAA 
    AGTTTGAAGT TGCAGGAGAA AGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9506975 [Map]; Strand: c
      • AT5G27010.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-5456-1 - 5-prime edge 
    ATCCTGCAGA GCTGCTGTCA AATAAATATG CTACTACACA TAAACTTAGA 
    GAACTCATTA CTGATGATGA TAAGTTAGTA AGAGACGATT CTTATACACT 
    ATTGACTGGG ATCTTTCTTG CTTGTAAAGA GGTATGTGTT CCTTTCTTCT 
    TCTTACTGTT TCTGCTTACA TTGGTTTCTG TTACTTTGTT GTGTTAAGTT 
    ATCCTTCTTA TATATGATGT ATGAGCTGGT GCTTATGAAT CTAACAGCTG 
    ATTTCTCTGT GTGAATCTAT GTAGGATATT AACAAGGGTC TTATGGTTTC 
    AAGTTTGATG CCATACATAT TTACCGCTAT GACTAAGTCA TCTATTGAAG 
    TTCGTTTGAT GGCTTTCAAA TTTTTCCGCC TTGTTTTGGA GTTTTACTCG 
    CCTACCTTCT CCTTATATGC TGAAAAGGTC TCTACTTAGA TCTCCAACTT 
    TTTCCTGTAG TATTCTTGCA AAGACGTTCC CTGAAATTTC TATCTGTTAC 
    TTGATGCANA TTCTCGAAAA CTACAAGGAT GTTATTCATA ATAACCATTT 
    TTATNTNCNN NATNAAAANA AGCTNCNNNN NNGGGNNNNN NCCNCNCNNN 
    C

AT5G27010.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G06350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR