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12-5532-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23219849 [Map]; Strand: c
      • AT1G62700.1 - [+] show detail - Arabidopsis NAC domain containing protein 26
        Distance: -1933; Region: intergenic
      • AT1G62710.1 - [+] show detail - beta vacuolar processing enzyme
        Distance: 4025; Region: intergenic
    Flanking Genome Sequence: 12-5532-1 - 5-prime edge 
    GTTATATATG GGTCATAAAT TTCACAAATA AGAACGGGAA AACGGGATGA 
    GACCCACATG ACCGAACAGC AAATTGTGAG ATTAATGATC GAAGCCTATC 
    TCACGCCAGA CCATCAGCCG CCACNGTCAA CACATTCCAA TTGTTGGCGG 
    GCCCTTGATT CCATTAATAG TGGCTCCAAT TCCACATCTG ATTTTTTCAT 
    CTATATATAT TATTTTGTTT CGTGTTTTTA TGTTTTGTTT TGTTTTGTTT 
    TATAATAATT TGGCTAAACT GGATGGTAAT TAAGTCTCAT GCAAAGTAAA 
    AAGAACATAC GAAAGTCTCA ATATAGTTAT GCGATGTTTA TCGAGGATTC 
    TTAGACACTC ATGTTAACAT TTAGACTACG AATTTGGACC GTAGAACATG 
    ACTGAGTTAA GTCTTACAGA AATCTATGAA CTTACTTTTG AAGATGCCAA 
    AGGACAAAAT GTTCAAAGAG AATATGTGTC CCATATATAT AACGGTATTT 
    AAAAAAGAAA AAANAAGATA TTTTAAACTT TGGACCGTCT CCATCAANGG 
    CTGGTGGGTG GTAATGGATC NGAGGTTGCC GNTCTCTTTN TNTNTNNAAA 
    NNNNGNTTTN NTNCNNAAAN NNNATNNNNN NNTNTTTTNT

AT1G62700.1

Model type
Protein coding
Short Description
Arabidopsis NAC domain containing protein 26
Curator Summary
Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
Computational Description
Arabidopsis NAC domain containing protein 26 (ANAC026); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC 007 (TAIR:AT1G12260.1); Has 3282 Blast hits to 3264 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 6; Plants - 3017; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62710.1

Model type
Protein coding
Short Description
beta vacuolar processing enzyme
Curator Summary
Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.
Computational Description
beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Link
InterPro Scan - TAIR