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12-5538-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23450515 [Map]; Strand: w
      • AT1G63230.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -139; Region: promoter
    Flanking Genome Sequence: 12-5538-1 - 3-prime edge 
    CCAACGAGAG TGACTGAGCC CTTGATGACC GGTTTAATTG GCTGGCCNGN 
    CCGACCNGCA CTACTTGNCT TANATAGATT CGTTTCCCGG TTCAGATGAA 
    CCGATTCGTT GACTTTACCA ACCGGTAGAC TTCTTCTCGC CCAACTCAGA 
    AAACAACCAC AGAGAAACAT TACCAAAACA AGTTCTAGAA AAGAAGAATC 
    AAAAATCTCA CGAGTTTATG AAATCATTAA AAACAATCTG AACAAAAAAT 
    ACGCTTTCAA ATGAAAACTC AACATTTTGT TCCCAAGACT CAAATCAAAC 
    AGTGACACGC ACAATGGTTT CTTCTCTTAG TATGATGCTT CAGAGTTTTT 
    CCAGCCCCCA TAGGACTCCT CGTCCATACC CCTGCTTCGG TTTTCCTAAC 
    AAACACCACC ACAATAAACA TATTGTTCTT TAGATTCTAC TTAAACATTT 
    GTAAGACCAA AAATCAAGAA CAATGCAAGA TGTTTTATAC CGAGGGCTTG 
    AAGGAGAGAG CCACCCAAAT CTCTCCTTTG TACTCTTCAT CTTTCACCAC 
    ATTGTATGCA GTTGGTGGAA TACTTCCTTC CACGAAAACC GGCTCCAACG 
    GAATACTGCA TTGTTTCATA ACATAACTCC TCAATTAGGT TCTAAAGGTA 
    TCANTTGGGA ATCTAAAACG ATGTTGTTTG AGGAACTTAC GTTGCTTNAC 
    CAACCGNATT ATNCTNTGT

AT1G63230.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63630.1); Has 57300 Blast hits to 14267 proteins in 286 species: Archae - 3; Bacteria - 43; Metazoa - 749; Fungi - 672; Plants - 54190; Viruses - 0; Other Eukaryotes - 1643 (source: NCBI BLink).
Link
InterPro Scan - TAIR