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Mutant Lines
12-5554-1

12-5554-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 22834153 [Map]; Strand: c
  - AT1G61810.3 - [+] show detail - beta-glucosidase 45
    Distance: 0; Region: intron12 (CDS)
  - AT1G61820.1 - [+] show detail - beta glucosidase 46
    Distance: -925; Region: promoter
Flanking Genome Sequence: 12-5554-1 - 5-prime edge
```
TTAAGAATGT CGCAAACAAA TATATATTTT GATTAATTTA AATTTTTGAA 
CTCGATAAAT AAACCTGATT TGTATGACTA AGTGTTATAC AGTTTATATG 
GCAACGAAGT TGACTTCTAT GTACCTAGAA ACGATCTTGT CCTGAAAATA 
CCAAATGAAT T
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 22834265 [Map]; Strand: c
- AT1G61810.3 - [+] show detail - beta-glucosidase 45
  Distance: 0; Region: intron12 (CDS)
- AT1G61820.1 - [+] show detail - beta glucosidase 46
  Distance: -813; Region: promoter

ATTCTTAATC GAGAATTAAA AATTAAAAAA AGTTGCGTGG TTGAGTTAAT 
CGTTTGGTCT CCATCGCTGA TATCTTCAAT TTCTCTGAAT TAATCTTCAC 
ACAGCTGTAT TATAAAGACC TAGAAAAGAA AACAGATATA CTAGTAACCA 
AACTTAGAAT CAAGAAAGAA AAAAACAGCT ATAGAGTTGA ATAAGAAGAA 
GAAGAAGATG ACATTTTTTA AACCAATTAG AATCATCATT TTTTTATTCC 
TATTTTTCAT ATTTCTTGTG GTATACGCAA CCGTGTTCTG CAAATTTTGT 
TCAGACACTG GAAACTTCAA AAGAAGTAAG TTGAGGTACG AAACTTCCGA 
TGATAGTTAT GAAGCTAGGA GTAGCCATGT CACCAACCAT ATCCTCAGCC 
GCCGCAACAC CAACCCCTTC ACCAAATGGG TCAACGTTCT CCGCCGCACT 
ACCACTTCTT GTACGAAACC GTAAGTTTCT TCTTTTTACT TACATTTAGA 
CAAACGTATG AATTAGTCGT GTGTTTGCCA TTAAAAAAAA AAAATTAGCC 
GGGNCNTAAA NTNGNAAATT TGGGCNNCGG NGNATTTATT TTTTAACCCG 
GGAGTAATNT GGANAACCTT TNTTAAGGAA TNTGTNGGGG GTNAAAAAGN 
AAAANTTCNN NNNTTANTTA NNGTTNCCCA CTGGCAAAAC ANAAAANNTG 
NGNTTTNGAT

AT1G61810.3

Model type: Protein coding
Short Description: beta-glucosidase 45
Computational Description: beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1).
Link: InterPro Scan - TAIR

AT1G61820.1

Model type: Protein coding
Short Description: beta glucosidase 46
Computational Description: beta glucosidase 46 (BGLU46); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11434 Blast hits to 11077 proteins in 1473 species: Archae - 142; Bacteria - 7926; Metazoa - 720; Fungi - 201; Plants - 1444; Viruses - 0; Other Eukaryotes - 1001 (source: NCBI BLink).
Link: InterPro Scan - TAIR