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12-5633-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24620498 [Map]; Strand: w
      • AT1G66140.1 - [+] show detail - zinc finger protein 4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-5633-1 - 5-prime edge 
    GTGGCAGCAG CCGCATAATT GCTACTTGAT CCTCTACCGG GGAAGACCCC 
    AGCAAGACCC ATACGCATAG CGCGTTTGGC GAGTGTTCTC TCACAGTTTG 
    TGAGCGTTTT GGTGACCACC TAGCGCNTTG AGAGCTATAG AACTTCCTTT 
    GGCAGTAGTT ACAAGAGAAG ACTCTCTTTG ATACAGATGG TTGTTGTTGC 
    TGCTGCTGCT CCGGGTTACT ACTCTCACTC GTGCTCGAAA GTGGCAGCGT 
    CAAAGACGAT GATTCAAGAT CCAGATTATT GTTGTTGTTG TTGTTGAAAC 
    TGAGGCTAAG ATTCAGCGAG ATTGGTTTGT AATCTTCCCC AACCGGAGAC 
    AAGNTTGAGG CCACTTGGCT GCTACTACTG CCCGATGAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24620382 [Map]; Strand: w
      • AT1G66140.1 - [+] show detail - zinc finger protein 4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-5633-1 - 3-prime edge 
    GCTGCCACAG CAGCCGCTCT CTCGTGTTTG CCGCTTCACG GAAGCGGAAA 
    CGGGAACATG ACATCGTTCA GGACTTTGGG AATCCGGGCA CATTCCTCGG 
    CGCACGACGT CAGCATGACA AGGCAGACAC CAGAAACACT TATTAGAAAC 
    ATTGCCAGGT TCAACCAGGG GTATTTCGGT AATTGTATAC CTTTTTACGT 
    GGAGGACGAC GAGGCCGAGA TGCTCTGGCC GGGGAGTTTC CGGCAAGCTA 
    CGAATGCGGT TGCGGTTGAA GCGGGTAATG ATAATTTAGG TGAAAGAAAA 
    ATGGATTTCT TGGACGTCAA GCAAGCGATG GATATGGAAA GTTCTCTTCC 
    AGATCTAACC TTGAAGCT

AT1G66140.1

Model type
Protein coding
Short Description
zinc finger protein 4
Curator Summary
Encodes a zinc finger protein containing only a single zinc finger.
Computational Description
zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR