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13-0026-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3785967 [Map]; Strand: w
      • AT1G11270.2 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G11270.3 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: intron2 (CDS)
      • AT1G11270.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0026-1 - 3-prime edge 
    GNTGGAGGCN CGNGCACCNT NCNTCNNCNN NNGCNNTAAA TGANNCGNAN 
    CNATTNCNGN GTATNCTGNT GGATCAGGNT NNGTTGGCTC ACCAGANGGN 
    AATAGAATCC AGCGATTTTA TCATTTCCNT CCTTCACNCN GAANCTTTTN 
    CANGCCTTAT GCAGAAGCNT CNCTTNTCTC CNNTGANCTG TGACCCTGTT 
    GGCGACTCCA TGNGCATNNT NGATAATCAC NTTGTNCGTT TCTGANATAA 
    ACAGGTCCTG CCCANNCTGA TATGGTCCTT GGATTCTTAA GGCGNCAACA 
    NNGACATGGN ANAANTTGAG TTCNATNTNA TCTCACTNGT AANTNTTCTN 
    TTGGTTTTAT ATATTTCANG TACCCTTGGG CTNCAATANC AATCATGGNC 
    CGGGAATAAN ANTATNGCNT CANTGGNNNN NNNNNGNATG NANGACNTNA 
    NGGNNGANAT NGNNATTGTT CANTNNNNAA NNNNNNGNNA NTNANAAGCN 
    NAGGNGCNTG GCGGCNAGGC CNNNGTNCGT ANNGCNNCGA NCGCGTNAAT 
    NCGNGTTNNT AATNTCACCN AGCNNTTTTT TATGTTNTNG AGTTTGTGTT 
    GCAGNNTCNC NNNNNNNNGA NCATNGTTTN TTTNNCNATT NNNNCCAGTN 
    NTGGACNGGN NTTGTNNGCN CGNNNNTCGC NNATGCGNCN TANNNGATCT 
    TNNAANNGNC ATNGCGTTNT NTNNNNTGNG NCNNNNTNNA GNACTTTATC 
    TTCCNNTTTN ATNNTNAGTT TTNGTTTATT NNNAATNCAT NNNANANGAA 
    CNANCGTNGN NGNNTGNANA NACNNCNNNG NCANANNG

AT1G11270.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1191 Blast hits to 1176 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.2

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.3

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR