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Mutant Lines
13-0033-1

13-0033-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 18076421 [Map]; Strand: c
  - AT2G43560.1 - [+] show detail - FKBP-like peptidyl-prolyl cis-trans isomerase family protein
    Distance: -923; Region: promoter
  - AT2G43570.1 - [+] show detail - chitinase, putative
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 13-0033-1 - 5-prime edge
```
GTAGCGGAGG AGATTCTACA GCCAAAGCCG CCAACAGGAT TAAGTATTTC 
CAAGACTATT GTGGCAAGCT
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 18076537 [Map]; Strand: c
- AT2G43570.1 - [+] show detail - chitinase, putative
  Distance: 0; Region: exon2 (CDS)

TCCGCTACAC TCCCTACTAT TCACTGCCCT GATTGTTGCG CCAAAGCCCG 
ATTTAAAACT CGTGCGAACA TTAGTGGTCC AGAACCAGAA AGCGGTCTTG 
AAGGCAAGAA CCTGGTCTTG AGCAACTTTC TCTGGTGAAG CCAATAAGTT 
CTCGTCCAAG GCTTTGCCAC AGAGACCGTA GTTGTAGTTC CAAGAGAGCT 
GGATTGCACC ACGGCCATAG TAGCCCTTTC CTTGTGCACA TGGGAACTCT 
GGTTTCTCTG TGTCGCAGTA CTCTCCGGAT GCGGCCTTGG CTGGTCCATC 
AATTTCCTCA ATGTAGCACA TGACTGCAAC AAGGTATAAC CATATGGTCA 
CAAAAACGAA ACCTATAGTG GTGGACATAT ACGATTAACC AAAATTTGTA 
TACAACAATT ACTGATTTTA TTATCTTATG CTGAAATTTA ATTTAGTCAA 
ATTGAACCAA TATAGTCGTA ACTAGAATAA AATTTATGTT ATAAGTATCT 
TTATTCATTC AAAATTATAT GAGAAAATTT ACTTACACCC TGTTTCTTGG 
GCTNCGTGAG CGAAAAACGC CGCGATTTCG CGTTTGGAGA NGGAAGCACC 
GAAGCTAGGG TAAGAATTAG CTGCGGCCAT GAAGGTGTCG TGAGTGTANA 
ATCCTTTGCC AGGACAATCA CCTCTTGGTT TAGTNTAGAG TTAAAAAAGT 
CAGGTGTCAC CGNTCCTTNT AGTGAAACAN CAGG

AT2G43560.1

Model type: Protein coding
Short Description: FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Computational Description: FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 8823 Blast hits to 8572 proteins in 1646 species: Archae - 42; Bacteria - 4685; Metazoa - 1489; Fungi - 464; Plants - 749; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43570.1

Model type: Protein coding
Short Description: chitinase, putative
Computational Description: "chitinase, putative" (CHI); FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2763 Blast hits to 2517 proteins in 507 species: Archae - 0; Bacteria - 569; Metazoa - 35; Fungi - 239; Plants - 1787; Viruses - 9; Other Eukaryotes - 124 (source: NCBI BLink).
Link: InterPro Scan - TAIR