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13-0035-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 343574 [Map]; Strand: w
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0035-1 - 5-prime edge 
    AATCCAACGA TGGGCATAAT GGTGTCGTTC CCTGATCTTT TGTGGAGGCT 
    AAATCTGGAA AGCGAGGAAC TTTCAGAGTT TCCGGTGAAC ATCCACTTAA 
    GCACATCTCC GGTGAATGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 343458 [Map]; Strand: w
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0035-1 - 3-prime edge 
    GTTGGATTCC TCCAAGGTCT CCGGGTCCTC GATCTGTCTT CAAACGGCTT 
    CACCGGTGAA TTACCGTCTA ACATTTGGAT TCTCACAAGT TTGTTGCAGC 
    TCAACATGTC CACCAACTCT CTCTTCGGTT CCATACCCAC CGGCATTGGA 
    GGATTGAAAG TCGCTGAGAT TCTTGATCTT AGTAGTAATC TTCTCAACGG 
    AACCCTTCCT TCTGAGATCG GAGGAGCCGT CTCCCTGAAA CAACTTCATC 
    TCCACAGAAA CCGCCTCTCC GGCCAGATTC CGGCAAAGAT CTCTAACTGT 
    TCGGCTTTAA ACACAATGTA AGTCAACTCA ATCTGTTATC TTTCTGTTAA 
    TTCACTGTGT GTGTTTTATC GTCTCTCAGT ATTAATGTAG CAGTAATATG 
    CAGAAATCTA TCGGAGAATG AACTATCCGG TGCGATTCCG GGGAGCATTG 
    GCAGTCTGAG CAACCTTGAG TACATTGATC TGTCGAGAAA CAATCTCTCG 
    GGAAGTCTTC CCAAAGAAAT AGAGAAACTT TCGCATCTCT TGACCTTTAA 
    CATCTCCCAC AACAACATCA CAGGAGAGCT GCCAGCTGGA GGTTTCTTCA 
    ACACCATCCC TCTCTCTGCT GTCACCGGAA ACCCATCCCT TTGTGGCTCC 
    GTCGTTAACC GCTCATGTCT CTCTGTCCAC CCCAAACCAA TCGTCCTCAA 
    CCCCAACTCC TCCAATCCAA CAAATGGTCC TGCTCTCACA GGGCAGATCA 
    GGAAGAN

AT5G01890.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Computational Description
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR