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13-0049-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4635234 [Map]; Strand: w
      • AT1G13530.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: -105; Region: promoter
    Flanking Genome Sequence: 13-0049-1 - 5-prime edge 
    CTGTCATCGT TTATATAAAA CAAAGGATCA TAAGAACGTG CAAGGAAGTT 
    TACTAAGCTA TTGTTTATAA ATATAATCTG AGGTTTGACC TTAAACATTT 
    GTCAGAATCT CCTGTGGATG AGTACTAACA AGTAAGAAGA CAAACAAACT 
    CTATATTTTA TTCTTTCTTC ACCCNAAAAG ATTGAAGATA ATATCAAAAC 
    ACAATACNCG GNAAAAACCN AATTGAAAAT GGNTATNGAT AAATCACACC 
    TGNCCNANGG NTTCATGNCN TTGNNANTGN AAAANNTTTT GCNNAATTGG 
    GTGCGNGANA ANCTNACAAN CCNGGNCGGG AAANANCNCN GCCCCTTCNG 
    NNGGGANNNN NNNNNANNGN NNAGNC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4635118 [Map]; Strand: w
      • AT1G13530.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0049-1 - 3-prime edge 
    GATGACAGGT TAGATCTTGA GTAACAAAGA ATCAAGGAGA GATGTATGTA 
    ACAAAGCGTT TGTCCGAGTA CCAGAGAAAC CCATCGGAGC TTACTTTCCT 
    TCCAACGGAA GGTCCAAACT CCGGCGTATT GGTGATTCAA GACGAAGAAT 
    CACAGCCTAC ATGCTGTTTT GGCAAATGCT TTGGTTGTGA TCTCAATGGT 
    TTGCCGTTTC CTCAGAACAC AAGAGTCACC GTTAAATACC AAATCGGACG 
    TTAGTTACTA GTCATTTCAC TCCTAACTTT CTGTCAATCA TTTTACTTTA 
    CTCTGTTTCT GTTTCTTCTC TGTTTATTAT CTAAGCT

AT1G13530.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13500.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR