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13-0053-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19605231 [Map]; Strand: w
      • AT2G47880.1 - [+] show detail - Glutaredoxin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0053-1 - 5-prime edge 
    GTGGTGATCT TCACGAAGAG CTCATGTTGT CTCTGCTACG CCGTTCAGAT 
    CCTGTTCCGT GACCTTAGGG TTCAACCAAC CATCCACGAG ATCGACAACG 
    ACCCGGACTG CCGTGAGATC GAGAAGGCTC TTCTCCGGCT CGGCTGTTCC 
    ACGGCGGTTC CAGCTGTCTT TGTCGGAGGC AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19605115 [Map]; Strand: w
      • AT2G47880.1 - [+] show detail - Glutaredoxin family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-0053-1 - 3-prime edge 
    ATCACCACTC CTTTCTCTGA AGACATTCTC ATCACTTTGT CCATGATCCT 
    CAGAAGTCTG AAGATCTGAT GATGGCTAGG GGTTTAAACT TTAGCGTTTT 
    GATGTATGTT TTGTTTTGTT TTGAGTATGT AAAAAGCT

AT2G47880.1

Model type
Protein coding
Short Description
Glutaredoxin family protein
Computational Description
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).
Link
InterPro Scan - TAIR