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13-0062-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 204283 [Map]; Strand: w
      • AT2G01450.1 - [+] show detail - MAP kinase 17
        Distance: -1977; Region: intergenic
      • AT2G01460.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -1853; Region: intergenic
    Flanking Genome Sequence: 13-0062-1 - 3-prime edge 
    GCCACCATAG ATANCAAGGT CANTTCACAG TCATTAAGTC CTACTAAGTA 
    CTAACCACAT ATCATCCACG TAAATAAATC AAGCCCGCGA GATCCACGTA 
    AGTTTTAATC CACTACTAAC GCAAACGTAC NGTAGAAGTG TTTTCAGAAG 
    ACACCACATC GATAGGTCCA GAGATCGAAT ACCTTTGAAG CTCCTATGGA 
    AGAGTTATTC AAAATAATTT GCCTCCCACA AGTATTATTT CATTTAGTGT 
    AGTTCTTAAA TAAAATATAT ATGCATATGA TTTATGTCCT TATCATGTTC 
    CGTACATTCT CTTCCGTCAA GATAGGAAGC T

AT2G01450.1

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 113085 Blast hits to 112072 proteins in 3455 species: Archae - 88; Bacteria - 12258; Metazoa - 41885; Fungi - 11781; Plants - 27798; Viruses - 485; Other Eukaryotes - 18790 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01460.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, kinase activity, nucleotide binding, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), ATPase, AAA+ type, core (InterPro:IPR003593), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 3953 Blast hits to 3156 proteins in 1342 species: Archae - 38; Bacteria - 3073; Metazoa - 244; Fungi - 122; Plants - 227; Viruses - 4; Other Eukaryotes - 245 (source: NCBI BLink).
Link
InterPro Scan - TAIR