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13-0068-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19122589 [Map]; Strand: c
      • AT3G51560.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-0068-1 - 5-prime edge 
    CTCTAGAGTC AGTTTCTTGG GGATTTGAGC AGTTTCCTAG TCATTACACC 
    TTCAGCGATT GCTTCAATAA GTCTCCAAAA GTGGCTAGAA AACGAGTTGT 
    AAAAGGCCTG GCCTAAAGTA GCAAGCATTG GCAACGAACA TCAGCAGGTA 
    ACTCTCTCGT TCTCATGTCC CTTCTTTCTC ACTCATACAT ACTTTAGCGT 
    ATATGTAATT TTCCTTTTTC TTGTTGGGAC CAGGAACTCA TCAAAGCACT 
    TGCATTCAGC ATTTGCGGGC CTGCAAGAGC AGATCAGGCA ACCTCTTATA 
    ATTTGCGGGC AGGNTCATTT GCAACGATAG AGATAACTCC TTCCCTGCGA 
    AANACANTCT TGGGGGTTGN TATCTTCGNT GNAGTATCGN TTTCGGNTGA 
    TAGNCACAAC AACCCTGGGC TTGGCGTTAG GTGCNTAANC CANGGNAGAC 
    AAANAAAANG GGGGGGCGCT GGNNAAGCAA AAAAAAGGNN TTNNGNGGGN 
    GGGGNCCNNG AGAAACNCCC NNNNGGTNNN NAGGNNNACA NGNNNNGNGG 
    TNTNNNNNGN GCCCCANNNG NTCNGNGGNN GNNNGNNGNG G

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19122705 [Map]; Strand: c
      • AT3G51560.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-0068-1 - 3-prime edge 
    CTCTAGAGAC ACACAACCAT GCACGTTCAA CAGTTTCAGG CTTTGGGGAA 
    GCGCCGGAAG CAATATGAGG TTTCTACAAT GTCTTAATCT AAGGCTATGT 
    AGTTTAGATA ACTGCTTTAT GCTTTCAGGG ATTTTGCTGA AACCATTCCG 
    ACCAAGATCC AACAGCACTA CCTGAAGGCA AGGAACAAAT CTCTTCCGGT 
    ATATGCATCA AGGATGCATT GAAGAGGGAT AAAGATACTA GGGCATAAAA 
    TCTTGGGACC AAGCCATGTA AACTTGAAGA TGGCAGCCTT GGTCGAGGCA 
    AATATTCTCT ACGCTGCTCT GCATTCTCAT TGAAAGTCAA GAGAAGATAA 
    TTCAAATTAC TGATGCCAAT TTCTGATATA CCATTCTGGA TAATTGATGT 
    TGATACTTCT CTTATGGACA TCCCAGATGG ATC

AT3G51560.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G19520.1); Has 29226 Blast hits to 20052 proteins in 857 species: Archae - 16; Bacteria - 1964; Metazoa - 4192; Fungi - 293; Plants - 21872; Viruses - 18; Other Eukaryotes - 871 (source: NCBI BLink).
Link
InterPro Scan - TAIR