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13-0070-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11026271 [Map]; Strand: w
      • AT4G20450.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-0070-1 - 3-prime edge 
    AATATATATG ACCAGTAATT GCATTCAAGA ACATCCAAAC AACTTATAAA 
    TTACAAAAAC CGAGCTGGCA AGGAGATCCA TGTGTACCTA TACAGTATTT 
    GTGGACTGGT CTAAACTGCA GCAACAAGTT TCCGAATGTT CCCCCAAGAA 
    TCATTTCCTT GTAAGATATC ATTCATTACA CTCAAGTTTT CCAGTTCAAA 
    TTGATTACTG TTTTTGTAAT CTATCTTAAT ATGTGTTCTG GCCCTATACG 
    CAGAGACTTT TCTTATTATG GATTGAATGG GACTATATCA AGTGATATAC 
    AATATCTTAA CCAGCTACAG AAATTGTAAG TCTCATATCT CCTATATACA 
    CGGGGAGAAA TACACTTTTT ATACCTGTAT GGCTAGAGAA ATTTGTTTGA 
    TAATCATGAT TTATTTATTT GTATGTTCTA GGGACCTGTC AAATAACAAC 
    TTGACAGGAA AAGTGCCTGA ATTTCTCGCC AAAATGAAGT TGTTGACAGT 
    CATGTAAGTT CCCCTGGAAG TAAAACGAAT AGTGTGGTTT TAAATCTTTA 
    TGCATCTAAT AACGTTTTGA ATACATTGCA CAGAACCTTG AGTGGAAACA 
    ATCTTAGCGG CTCAATTCCT CAAAGCCTTC TTAACATGCA AACAATGGGC 
    TAACATNGCT GTNTAATGGA AATAAAAACC TCTGTTTGGA NACNANN

AT4G20450.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G29000.1); Has 157406 Blast hits to 121766 proteins in 4522 species: Archae - 95; Bacteria - 13354; Metazoa - 44140; Fungi - 9932; Plants - 71049; Viruses - 392; Other Eukaryotes - 18444 (source: NCBI BLink).
Link
InterPro Scan - TAIR