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13-0094-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8139676 [Map]; Strand: w
      • AT5G24080.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-0094-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA CAGCTTTCAA AGATGTCCCA TTCGTTAGTT 
    CCTATTCATT TATTTTCAAA AACTCGTTAG GACGTTATAA TCTTTATGTT 
    TATAACTAAT TTAAGCCCTT TCTTTATATT TTAGAAATCG TCTAAGTTTA 
    CCTTGTAGGC CCATCCAGGG TAAAAGAAAT CCTCAGCGTC ATAGGACATA 
    TCAAGATTTC TCCTACCACC TACGATCTCT AGAAGAAGCA TTCCATAACT 
    ATACACATCG GCCTTCACCG TGATCGGGCG GTTACTCACC CATTCGGGCG 
    CTAGATACCC TCTCGTNCCT CTAATCATCG TAACCACATG CGAATGCTCT 
    CTCCCCATCA TCTTGGCTAG CCCAAAATCT GATACCTTAG GACAAAAATT 
    ATCATCCAAC AAGATGTTTT CAGGTTTAAT GTCGCAATGT ATAATCCTGT 
    TTCGACACTG CTCATGAAAA TATGCGATTC CTTGTGCAGT CGCAACCGCT 
    ATTTCAAAAC GTGTTCGCCA ATCAAGTAGA TTAGCTGTCT GTTCTGAAGA 
    GAATATCCAT TTGGNTAACG ACCCATTTAT CATGTACTCA TAAACTAGAA 
    GCCTGTATGT CACCAAAAAA ACATNTATTC AAATCTGTTN GCTTGAAACA 
    GAGNAAAATG GTTTNGNAAA AGNNTNCTAA GGTNATACCG GGGNGGAGTC 
    TNCCGAGCAG TAACCACCAN GCGANAAGNT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8139666 [Map]; Strand: w
      • AT5G24080.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-0094-1 - 3-prime edge 
    ANTTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATA 
    AAAGGCTACA AGGAGTAGCA GAGGAAGAAG AAGTAGTGAA GGCTCTTAAA 
    GTGGCTTTCT GGTGCATACA AGACGAAGTA TCGATGAGGC CGTCGATGGG 
    TGAGGTGGTT AAGCT

AT5G24080.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR