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13-0098-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18029748 [Map]; Strand: w
      • AT3G48660.1 - [+] show detail - Protein of unknown function (DUF 3339)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0098-1 - 5-prime edge 
    GTTGTAGTCG CTGAGATACT GTGCGTGCTT TNGACTCCGG GACTTCTCTT 
    TCAGATTCCG GCGAGAGGTC GTGTTGNTGA ATNNGGNAAT ATGCAGACTA 
    GTGGAGCGTC CATTCTCGTC CACACCATCA TTTTCTTCGG TCTTATAACC 
    ATCTTCACCA TCGCCATTCG TCTCCATATC TATACCGGTT AATTGTACCG 
    TACCGGATTC GTAACTTCCC CCGGTTGTCT AGTTTTATGG TTTGTTTTGG 
    ATTTTGTTTC TTCTCTGTGT CTTGTCAAAA CGTTATGGAA TTTGTGAATC 
    TGAATATGCG TTAAGTTAAT TTCAAAATTC GCTATGTTTG ATTCTCGGTT 
    TGGTTTCCGG TTAAATCTGG TTATGGCGTT GATTTGAATT TGATGGTAGG 
    CACTAGGCAG TTAGCCTTAG TTTGGTTTAT TGGTATTCGA GTTCAAATTG 
    GAATTGAGTA CTAAAATGCT CTGTTACTCG TTTCTGCATC TCGAGTTCTT 
    ATGGATTTGC TTACGAAATG TTCAATTTTG TTTGGTCTGG TTCGGGNTCG 
    TTCTGAAACG AATGTCNAGA GTCTTTTGCT TGGCTNNAAA CTNGCCTTGN 
    GGTNANCGGG TAAGGNTNGN AANAATAANT GGGCTNTNAN TNANNGNNNN 
    ANTGGGCCAN CNCNTGATNC NCCANAAGAA NNGATNGGNN GGNTNTNANA 
    TNTANGGGAN GNNANGACNN TNAA

AT3G48660.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF 3339)
Computational Description
Protein of unknown function (DUF 3339); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G63500.1); Has 274 Blast hits to 269 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 274; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR