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13-0141-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 754691 [Map]; Strand: c
      • AT4G01740.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0141-1 - 5-prime edge 
    CNGGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TNCNGGAGCN 
    NTCCATACTN NTTTAATTCC TGNGCAANNT NGGTGGAGGA CGAAGGGCCA 
    TTCCANACNG NCGGCGANAG ATNGGAGANA GATATGCATG GGTGCATGCN 
    CATGAACCGG TTNGNNGNCA TNNCNAAGAA CACCATNAAC GNNGGAGTCT 
    TAGGTAATGC TCTTTGTGGC TGAAATGTTG TATTGTGTTT TCGTCTATTA 
    CCACATATGG CTCTATATCT TCTATTTCTT CGGGTACTCC TTCGAGTTCT 
    TTTCCGTTCC ACACATCTTC TCTAGTAGCA CATAGGGAAT GAGCGGCATA 
    GCCAGGACAC CTCGGACAAG AAAAACCTCC ACAAGTCCAA TCCACCTTCT 
    GGCGACAAAC TCCACATACC GAATTAACAA CACCAAGAAC AGAAGTTCGA 
    GAGACGCGGT GATCATGCCG ATTAATGTTT ATGACACGAG GAAGATGAAG 
    ACAGACTTGA TGGATCATAA AGTCACATTG AACACATATG TAAGGGCTTC 
    GGTCGCCATT CAAACCGNAA GCACTACATA AAAAAGAACG GANACTTGGG 
    ANCANGGTGA GTTGGTGGTC ATGAGCTTTC AAATTCCAAA NANATCNTTG 
    NGGNGGATTT AAAACACAAN ANATATNCNA NGGGGANNTT NCNCNNNNAA 
    CAATGATNAA ACAATCCNNC NNNNNNTNNT TTNNNNCNTA AACAANANTN 
    NNGNNNAANA ANTNNGNNNN NGNNC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 754765 [Map]; Strand: c
      • AT4G01740.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0141-1 - 3-prime edge 
    GTGCTACACA ATGAATGTCT TACTCTAGTT ACTAATGAGA CTGAAGTCTT 
    TAAGTGTTAT GCTTGTGAGA GATGGTCCAA TGGTTTCAGG TACCAGCAAG 
    GGTATAAATC ATTCGATGTT CGGTGCAGGT TCAATTTCTG AGCCATTTTT 
    CCATCCAAGT CATCCCGATC ATCCCTTATA TTGCATTTTA CCTTACGGAA 
    AAATATTCTG CAATGGTTGT TACAAGTTCA AATATGGAAT GCTCGTGTGC 
    GTTGAATATG AATGTAATCA TTTAATATGC TTCAATTGCG CCACTCTACC 
    ACCAGTGGTA AAGCATAGAG TTGACGATCA TCCTCTCTCA CTATGCTATG 
    GTGAAAAGGC TAGTGGTATA TGTTGGTGTG ACATTTGTGA AGCCAAAGCC 
    GATCCAGAGA TATGGTTCTA CACGTGTAAA G

AT4G01740.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01930.1); Has 1534 Blast hits to 622 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1528; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR