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13-0192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3731403 [Map]; Strand: c
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-0192-1 - 5-prime edge 
    GATGGATTAA CCAAATCCTG CTCGTCCCAG TAAAATTCAT CACGAAACTG 
    AGTCCGGGAA GAAGAACATG AAAGCAAATC TATAGTACAA ATCTTCTCCC 
    ATGAGTCTTC TGATGATTTC AACCTCCAAA TCTCTTGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3731519 [Map]; Strand: c
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-0192-1 - 3-prime edge 
    AATCCATCCA CACCTGTGGC GTTATGCAAG AACAAGACAA TTTTGCTCTC 
    ACATCGCTAT TCCCGCGGTC TGCTAAAATA TGATCCCCTA ACAAAGTCTC 
    TAGCTTCATT TTACCAACGT CCTTTGTCTC GGAGAAAAGT TTCTTATTTT 
    CAAAGTTTAA TCTCTCATAT CTAAACAAAT CTACCTACNT GATTTTGACG 
    TGTTTGGAAG AGACGAGAAG AGCTTTTCTT AAAATATATA CAGTATTGGG 
    ATTATACATG AATACTAGCC AAAACAAGAA GTTAGTGACT ACTAAATAAT 
    GAAAGCAAAA AACAATCTAA AACTATTTTA CTATATCACA TAATAAAGTT 
    GTACTTTTCA ATATTCTTAA AGTTTGGTTT GAGTTGATTT CAGATTTTAT 
    GTCAATCAAT CTGTGGAAGT AACAAACATT TCTTATCGAA ATAAATGATC 
    TTCTTTTTAC TTCACCAAAT AAAGTCGTTG ATTGGGATTG ACCCTTATTA 
    TGCAAGAAAA CTTAAAACAC CAAAACATGG GAAGCACTTA NATCATGTTA 
    TGCTCTTGAG TCTTGTCCAA AAGAGAGACN AATTATAACA CGGGAACTAG 
    AGTAATAATT TATAACTAAA AAAATCANTT NAATNCNNTN CANNCNNNNG 
    TNANATNTNA TAAACCNGGG GATNNNNNNN NNGNCCNNNN NCNNC

AT1G11150.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 30% identity and 3.2e-59 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus}
Link
InterPro Scan - TAIR