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13-0196-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 16143069 [Map]; Strand: w
      • AT1G43000.1 - [+] show detail - PLATZ transcription factor family protein
        Distance: 1414; Region: intergenic
      • AT1G43005.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -8026; Region: intergenic
    Flanking Genome Sequence: 13-0196-1 - 3-prime edge 
    CCCTTGGGAC CATCAGTCAA ATGACCTTGT AACGATAACG ATACATTCCA 
    ACTAATGATC CAACGACACC GTTTGGAAGC ATCAAGGTAT ATTAAAAAGT 
    AAGTTTCTTC ATAAGCACGG ATCGACACAT AGGCTAGGGT TTGTTGTCTA 
    TATATTAATC CTAGGTTCGA TAATACTGCA CCATATCATT TGTAGTATAT 
    AAATAACATG GAGATAAAAT TATGAAAGAC TAATAAAAAT AATTGTACGC 
    TTTCTCGA

AT1G43000.1

Model type
Protein coding
Short Description
PLATZ transcription factor family protein
Computational Description
PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G21000.1); Has 398 Blast hits to 398 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G43005.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G61060.1); Has 259 Blast hits to 220 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR