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13-0197-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14878356 [Map]; Strand: w
      • AT4G30420.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 13-0197-1 - 5-prime edge
    GTCACTTTCT TCCTTGAGAA AGACCCAAAC GCTTGGATTC TCCATTCCTA 
    CTCCGAGTTN GCCACATGTC TCTATGCAGT ACGGCACATA CAACATTCCT
    CTGTTTTTTT TGTCTTTCTT TGGATGTTGA TTAATCCAAA AATTAACGTA
    AACACTAATG CATTTGTTAG GGAATTGGGG CGTCAGCACT TTCTTTTACG
    GTCCAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14878293 [Map]; Strand: w
      • AT4G30420.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 13-0197-1 - 3-prime edge
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTGAAAGTGA CGACTGCACA TTGTATTGTT CCGAATAAAC ACATCCATGC
    TGATAAAGAG AGGTTATCTG GATAGTAGGC AGAGATTGGA ACCTAGGGTT
    TTGTTGAAAC AAAACTCACT TTTCTTGTAA GACAAGAAAC ATAACAACAA
    CAAAAAGTTT AGACTTTTGA TTTATTTAAT GAAGTTTACC TGAAGTATAA
    GCCAAAAGG

AT4G30420.1

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G28040.5); Has 3568 Blast hits to 3558 proteins in 670 species: Archae - 22; Bacteria - 1633; Metazoa - 4; Fungi - 0; Plants - 1218; Viruses - 0; Other Eukaryotes - 691 (source: NCBI BLink).
Link
InterPro Scan - TAIR