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13-0203-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8986914 [Map]; Strand: w
      • AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
        Distance: -3873; Region: intergenic
      • AT1G25570.1 - [+] show detail - Di-glucose binding protein with Leucine-rich repeat domain
        Distance: 4912; Region: intergenic
    Flanking Genome Sequence: 13-0203-1 - 5-prime edge 
    TCNATGTGAC CAACAAAAAA AAGTTAGTTG TTCATAAAGT ATCATGCTTA 
    ATATAATGAA TGTATGTTCC TCTTGCTAAC ATATTAATCC TGTATAGTTT 
    CCATTTTCCA GTTAGAGAGA TAGTCATTAT TAACATAATT AAGTATAAAA 
    GTATATTTTC ATATATAAAA GTATCTATTG AGTTATTCTA ATGAAACTCA 
    ATCACNTATN NNTTTTGTCA AATGCGGAAA TTTCAAAACA GACNGTAGGT 
    AAGGACTAAG GGGAACGAAA ATTTTCGTTT GTGCNAANNA AATCATGAGT 
    AAACAACCCN AATNTNTTNN TNAGNTCNGC AGGNTGGGNN NGCTGTGCAN 
    ANCNAAACNA ATTNNCNNNA AAACNACACC ATTNCNNGGT TCNANGAGCC 
    GCNNNNNNNN GNNGAGNGCN TCNCTTTNCT GGGGNTGTNA TNNNGCCCNC 
    NCCCCNCCGA ANGAGTNTNG GNTNGANTNG AAAAAGNTTN TNATNNNNAA 
    NTNANAANNT GTNTGNTNGG TNNGNAGANG AGGANGNGCN TGCCGNCGNT 
    TNNTTNANGG GGGNNGTGGN GGANAANTAN CCNAGCGTGN GNGGGTGTNG 
    GGTNNGTNNN NCNTNTANAN CACNANAGCC CAAANNNANA GNNANNGNNN 
    CNTGNAATGN GNGANAAANA ANGGAGAANT AANCAANCNN ANGTGGNGCN 
    CNTAAACNCA AANNAGNAAN NNGTAAAGAA NNNTGAGACC ACNNAAAAGN 
    NAANTATNAN AANATAAAAA A

AT1G25560.1

Model type
Protein coding
Short Description
AP2/B3 transcription factor family protein
Curator Summary
Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Computational Description
TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25570.1

Model type
Protein coding
Short Description
Di-glucose binding protein with Leucine-rich repeat domain
Computational Description
Di-glucose binding protein with Leucine-rich repeat domain; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 4 (TAIR:AT1G28340.1); Has 39900 Blast hits to 11672 proteins in 418 species: Archae - 2; Bacteria - 388; Metazoa - 87; Fungi - 9; Plants - 38059; Viruses - 0; Other Eukaryotes - 1355 (source: NCBI BLink).
Link
InterPro Scan - TAIR