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Mutant Lines
13-0222-1

13-0222-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 16693869 [Map]; Strand: c
- AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -40; Region: promoter
- AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -40; Region: promoter

ATTGGTCCTC GACGACTATA ACAAAACACA GAGTCGTCGA AATTTCTCTT 
CTCCTTTTCG TATTTTTTCA GTTCCAGTTA CATTCCAATT TCTTCGAAAC 
TTCTCTTCTC ATTTTACAGC GTTTTTGCTT CAATAAATAA TCCAAAGAAT 
CGGAGCCTTG CTTTTCAAAT CATACTTTCT TCAATACCAG TCTAAGAATA 
CTTTCTTCAA GTTCAAGCAT TTGTGATCTC TCATGGCTTT GTCTTCTTCT 
TTGTCTTGCA TCAAGAGATA CCAAGTCTTT TCGAGCTTCC ACGGTCCAGA 
TGTCCGTAAA GGGTTTCTCA GTCATTTACA CAGTGTCTTT GCAAGCAAAG 
GTATCACGAC TTTCAATGAT CAGAAGATCG AGAGAGGCCA GACGATCGGA 
CCTGAGCTCA TACAAGGGAT TAGAGAAGCT AGAGTCTCGA TCGTTGTGCT 
CTCGAAGAAG TACGCTTCTT CCAGCTGGTG TTTAGATGAA CTTGTGGAAA 
TCTTGAAGTG CAAAGAAGCT

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 16693753 [Map]; Strand: c
  - AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: -156; Region: promoter
  - AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: -156; Region: promoter
Flanking Genome Sequence: 13-0222-1 - 5-prime edge
```
GGACCAATGA CTATTTTCGT ACATATTATT ATTGAATATT TGGTTTGAAA 
AGGAGAATAT TTGTATTAAG TTAATTAACA ATAATATCGA ATTGACCATT 
TGAACATCAA GAATGAAGAA CCAAACTTTC TTTGCAAACG TTGAAATTTG 
ATATTTACCT ATTCGACAAG AAACTAAATT CTGCTTTTGG GNNNGACAAG 
NTAN
```

AT5G41750.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR