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13-0244-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12870093 [Map]; Strand: w
      • AT1G35160.1 - [+] show detail - GF14 protein phi chain
        Distance: 1300; Region: intergenic
      • AT1G35170.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 645; Region: intergenic
    Flanking Genome Sequence: 13-0244-1 - 3-prime edge
    ATTATGAGGT ACGTAGACTA TGCTTTAAAT TAACAAAAAT TGATAATTGA 
    TCATTTTTTT TGTCAAAGAT AATTGATGAT TTAAATGACA TTTTCTCCTA
    TTATTAATAT ATATATAGGA TTTGTTTTGA GATAAAATTT TGAATT

AT1G35160.1

Model type
Protein coding
Short Description
GF14 protein phi chain
Curator Summary
GF14 protein phi chain member of 14-3-3 protein family. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1
Computational Description
GF14 protein phi chain (GF14 PHI); FUNCTIONS IN: protein phosphorylated amino acid binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: cotyledon, guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 2 (TAIR:AT1G78300.1); Has 2689 Blast hits to 2679 proteins in 386 species: Archae - 0; Bacteria - 6; Metazoa - 1256; Fungi - 306; Plants - 766; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G35170.1

Model type
Protein coding
Short Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35180.1); Has 146 Blast hits to 146 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link
InterPro Scan - TAIR