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13-0253-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 232464 [Map]; Strand: c
      • AT2G01510.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0253-1 - 5-prime edge 
    CTTGAAAGTA AGGAGGAAGG AAGGAAGAGA TGCTTGCGAA ACAAACGCCA 
    TTAACAAAAC AAATGCTCTC CGAGCTCTTA CGAGCAAGTT CTTCAAAGCC 
    GAAGCAGCTT AAGAAGATCC ATGCGATTGT ACTAAGGACA GGTTTCTCTG 
    TAAAGAACAG TCTTTTAACT CAGCTATTAG AGAATCTTGT AGTTATTGGT 
    GACATGTGTT ACGCACGCCA GGTGTTCGAC GAAATGCACA AGCCGAGGAT 
    CTTCCTTTGG AACACTCTTT TCAAAGGGTA CGTTAGAAAC CAGCTCCCTT 
    TTGAAAGTCT CCTACTTTAT AAGAAAATGC GTGATCTTGG TGTCCGTCCT 
    GATGAATTTA CTTACCCGTT TGTGGTGAAA GCGATCTCTC AGCTTGGGGA 
    TTTTTCCTGT GGGTTTGCTC TTCATGCCCA TGTGGTGAAA TATGGTTTTG 
    AGTGTCATGG GATAGTTGCA ACTGAGTTGG TGATGATGTA CATGAAGTTT 
    GGTGAATTGA GTTCTGCTGA GTTTTTGTTT NNNTCNTGCA GNNAAANATT 
    TANNGGNTNG GAATGCGTTN TTGNGGNTTG TGTTNNACNG GGAACNCCNN 
    TNNNNNNTNG NNNTTTNNNC NNNANNNNCN CNNNNGC

AT2G01510.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 35573 Blast hits to 13630 proteins in 255 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 94; Plants - 34882; Viruses - 0; Other Eukaryotes - 514 (source: NCBI BLink).
Link
InterPro Scan - TAIR