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13-0254-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29027723 [Map]; Strand: c
      • AT1G77260.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -766; Region: promoter
      • AT1G77270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -55; Region: promoter
    Flanking Genome Sequence: 13-0254-1 - 5-prime edge 
    ATCCCAACAC GATATACGGT GTTCCGTACC GTTAAAGTAC GCGCTCAAAT 
    ATGTAATAAC AAATATTAAG AATCTAATCT CTATTCCAAA GTATTATAAA 
    TGGGCCGAAA TGAAGGCNTT TTTGGCCCAG TTGAGATTAT TTCCAACTTC 
    TATCCTCTTA TTAATTTATA AACATGGCCT TTACAAAATT CTATTCTAAA 
    CATAAACATG GCCTTTACAA AAAATAAGGC TACCACACAC AAAAAAGGTC 
    CATTTAGCAA TGGTGCTAAA TGAGAAGAGC TTCTCTATTT ACCTAGCAGA 
    ATCAATAAGT CTAAGAGCAT TTTATTAAAT ACAATCCTCT GTATAAATTC 
    CATTACTCAT CCACTAGTAT AAAGGTTTTC ATTTATAGAA AAAAAGATTT 
    TTAAGTTTTT TATATTATTT TCATCATAGT TTAAAATAAA ATTTGAATTG 
    ATATTTTATT GGTACGAATG CACTCTGTAA ATTAAAGCAC GTGAGNNTGT 
    GGTTGATATA CCATACTCTC TCTTAAAGTC AGCAAGTCAA CACAATACCT 
    AACTGAAACT TGTCATTCAA TTTANATCCT CAACCATCAC ATTAAATAAA 
    TAAAATCTCA TCTTCTAACA GTTAAATTAA AAAGNTTTAA AATCCACATT 
    TAAAAGACAC TAGNTTTCTG ATTTGGCTTG ACCAAAACCT GNAATTNATT 
    TCCATTANGG GGAAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29027839 [Map]; Strand: c
      • AT1G77260.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -882; Region: promoter
      • AT1G77270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-0254-1 - 3-prime edge 
    GTTGGGATCA TGCATTTATG GTTGCTTTAC TACTTCCGGT GACTGGCGAC 
    TTCGACGAGC TTTATGGTTT ACCGTCAAAT ACGGTATAAA AATTCTAGGG 
    TTTTCTTCTA ATCGGAAAAC TTCCTCGA

AT1G77260.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 919 Blast hits to 909 proteins in 49 species: Archae - 0; Bacteria - 17; Metazoa - 3; Fungi - 4; Plants - 891; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G77270.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits to 388 proteins in 92 species: Archae - 0; Bacteria - 31; Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
Link
InterPro Scan - TAIR