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Mutant Lines
13-0258-1

13-0258-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4953125 [Map]; Strand: w
- AT1G14460.1 - [+] show detail - AAA-type ATPase family protein
  Distance: -198; Region: promoter
- AT1G14470.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: -955; Region: promoter

GGAAGGAGCA GGTGACAGCT CGGGATTCTC CTTCTTCTGG TCTCTCTGTG 
TCAGATCTAA AACAAGTCTT CACTCTTCTC ACGCCTCTTC AGTCTTCACT 
GTCTTTTTTC TTTTTGTTGC CCAAAATAAA TTGGAGAACA AATAATTTTT 
TCTTTTAGTT GCATTCATAA CAAAATATAG ATATAGGAGT ATTATCTTTT 
CTGTGACAAA TGTCTTCAGT CTTTAGATCT CACGTCTGAT CTGTTTTATT 
GTTTGGTCCG TTTGAAATGT CGTCCAACAA AAACGAATTA AACATCACAT 
GCCTATTTTA CTGCCATTGT TTTTCTTANA ATACTTATAT TTTCTTACAT 
TATTAAAAGA GTTTTGCTTT TGCTTTTTTT TCCTCTTTAT GATCGNGTTA 
ATATATAGTA CACACAAATA TGTGTATTTA CATGCATATG AACAAAGCTC 
TTGGGTCCTT ATAGTTTTGN GTTCTTTTAA TCATGCATTA TAATAATTCA 
TACATGCAAA AACAAACTAA CGGNGAATAT GCACATGCCC ACTATTTTGT 
ATGTTTTCGA AGTTTTCTTT CTGGCTCTCA AATTGATTCA TTAGTCTTGT 
AAGCAAACGT TGTCTCCATG TTATTTTGGA TAAATAACAT GTAGTCATGT 
NGAGAATACC CAGGAGGAAT CAAAGNCANC GACTGATTAA TAATATCATA 
AANGGGCCTG TTCTT

3 prime edge [+] show sequence

Chromosome: 1; Position: 4953054 [Map]; Strand: w
- AT1G14460.1 - [+] show detail - AAA-type ATPase family protein
  Distance: -127; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
TCCGACCCAT TTTTCACTTT TTCACATTTC TTTTCGTGTC TTTTTTTAAT 
TATTTTATTC ATTCTTTTAT TTTTGTTTGA TAAAAAGCAA ATCAATCAGC 
CAATCACCGT GAATTTTTTG AATTTCTTCA GTAATCTCTT TCTTCATCTC 
TCCCACTCTC ATCCTTTCGC TCTCACATCT TCTGTTTCTT CTTAAAAAGA 
TTCTTGGTAT CACCTGCGCA ATTTCCGGNG NGACTATACT AAATAGTTCG 
GAGAAGATTA GTCTAAAACT ATGTAAGATT TGTTTTCTGG AGAGAAAGAA 
AAATGTCGGG TTTAAGGATT TCGGATC

AT1G14460.1

Model type: Protein coding
Short Description: AAA-type ATPase family protein
Computational Description: AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, DNA-directed DNA polymerase activity, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G02480.1); Has 16118 Blast hits to 16088 proteins in 2833 species: Archae - 487; Bacteria - 9881; Metazoa - 404; Fungi - 514; Plants - 302; Viruses - 52; Other Eukaryotes - 4478 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G14470.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G08070.1); Has 45588 Blast hits to 14013 proteins in 255 species: Archae - 1; Bacteria - 22; Metazoa - 282; Fungi - 244; Plants - 44188; Viruses - 0; Other Eukaryotes - 851 (source: NCBI BLink).
Link: InterPro Scan - TAIR