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13-0279-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1053078 [Map]; Strand: c
      • AT4G02390.1 - [+] show detail - poly(ADP-ribose) polymerase
        Distance: 0; Region: exon14 (CDS)
    Flanking Genome Sequence: 13-0279-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AAGAGTAGCA TTCTGTTCTT CGAACTTGAA 
    AACTGCCAAG AAAAATTTAA GTCTGACAAT GCCAAAACGA GAAATCAGGA 
    TAATCTGTAT GGTAGGGACA AGCTCGAAAT ACCATAGCAT ACCTGTTGGA 
    ATCGATCAGC TTCAACAGCT CTCGAAGCTC TAAATAGTTG AGCAATCTCA 
    ACCGTATATC CCGAATGCGT CTTTGCATGA GTGTTCTCCA TGTAATTAGC 
    AACCTGATTT TGGTTTTAAG GAGTAAACAC CAAAAAGGTT TAAAACACAG 
    ACATGTTTGA GATACTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1053170 [Map]; Strand: c
      • AT4G02390.1 - [+] show detail - poly(ADP-ribose) polymerase
        Distance: 0; Region: intron14 (CDS)
    Flanking Genome Sequence: 13-0279-1 - 3-prime edge 
    CTCTGGCACG GGTCACGTCT CACTAACTGG GCTGGTATTT TATCTCAAGG 
    TAACATGTTA CTCTTTTTCC TCTTAGTGAT TACTTTTTTT CTTCTCCTCG 
    TGGGGGATTT TCAATTGCCT AGTGAAATCC AAACAGGTCT GCGAATAGCT 
    CCTCCTGAAG CGCCTGTAAC TGGTTACATG TTTGGAAAAG GGGTTTACTT 
    TGCGGATATG TTCTCCAAGA GTGCGAACTA TTGCTATGCC AGCACTGGTG 
    CTAATGATGG CGTTCTGCTC CTCTGCGAGG TATACTAGCT TCTTGTCTCT 
    ATTCATATAG AAAACAATAG AACTACTATA TAACAACTAT CCTTATGTTT 
    CCTAATGATA AAAACTTCTG TAGGTTGCTT TGGGAGACAT GAATGAACTT 
    CTGTATTCAG ATTATAACGC GGATAATTTA CCCCCGGGAA AGCTAAGGTA 
    CGAAGATAAT CTCATTCATA TTTCACACAA GTTCCTTATC TCAAACGGCA 
    ATGAATTATG ATTTACTACT TTTGTACTGT ACCTCTTGAA TTGTCATTTG 
    ATGGTTGCAG CACAAAAGGT GTGGGGAAAA CAGCACCAAA CCCATCAGAN 
    GCTCANACAC TANAAGACGG TGTTGTTGTT CCACTTGGCA AACCAGTGGA 
    ACGTTCATGC TCCAAGGNTT TTGNTTTGCT TCAACACACA TTCACAAAAT 
    ATAACTCTCT CAAATNGAAG GGNAA

AT4G02390.1

Model type
Protein coding
Short Description
poly(ADP-ribose) polymerase
Curator Summary
Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification .
Computational Description
poly(ADP-ribose) polymerase (PP); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, nucleic acid binding; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 1052 Blast hits to 1033 proteins in 170 species: Archae - 0; Bacteria - 15; Metazoa - 556; Fungi - 107; Plants - 166; Viruses - 5; Other Eukaryotes - 203 (source: NCBI BLink).
Link
InterPro Scan - TAIR