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13-0284-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12631395 [Map]; Strand: c
      • AT2G29480.1 - [+] show detail - glutathione S-transferase tau 2
        Distance: -74; Region: promoter
      • AT2G29490.1 - [+] show detail - glutathione S-transferase TAU 1
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 13-0284-1 - 3-prime edge
    ATTAAGGTAA CCAAGTCACT GCTGAGGTCA CTTTGGTTAT TTTATTCTTA 
    TTTCCTTCTA GTCTTGGCTT TTACAATCTC CAGACACACC ACGTTATTTG
    ATTGCTGTAA CTTTCAAATA GGTTTTTGAT CTTTTTACTT AAATATTAGG
    TCATTCTATT TTTCGAAAAA CTTTAAAAAA TAAAAAATAA AAATAAAAAA
    CAATGCAAGC ATATAAATCA AATATTTTCG GAGGCAAGAA GTATCTTTAA
    TTTAGGCAGA CTTAATTGTC TCTGCAATTT TGGTCATGCG CTCAATTTGT
    TTCTCTCTTG GAGGAATACA TCCCCTCACT GCCTCAACTT CTTCCAAATT
    CTTGATCCAT CTATTTAATT CCGGAAACTT CTCCTCTGGA ATCATATCAA
    TTCCAATACC TTTCCAAAGT CTAGCTAGAC AAAATGGGAT CATACTTCCT
    GCGATCATGT CCAAGAATCC GATTGTCTTG CCACCGAAGA AATCTTTTCC
    AGTGACTTCT TTCTCAAGAA ACATAAGCAG TTCCCGAGTC TCTTCAATAG
    CAACCTCTCT TCCTTTCTCT GCTTTTACAA GGGACCTAAA CCCTAGTGTT
    AGGATCTGCA AGTAAAGAAC AATATNTAAA CNAGCGAATA ATATAATATT
    GTTCTGCATA GAATCAACTA ATTAATCTGC AAATCAATAT TANTATACCT
    GGNCATCGAT GAACCTTGGC CCAAAAN

AT2G29480.1

Model type
Protein coding
Short Description
glutathione S-transferase tau 2
Curator Summary
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase tau 2 (GSTU2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 1 (TAIR:AT2G29490.1); Has 8866 Blast hits to 8848 proteins in 1276 species: Archae - 0; Bacteria - 4843; Metazoa - 860; Fungi - 165; Plants - 2104; Viruses - 0; Other Eukaryotes - 894 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G29490.1

Model type
Protein coding
Short Description
glutathione S-transferase TAU 1
Curator Summary
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase TAU 1 (GSTU1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 2 (TAIR:AT2G29480.1); Has 9031 Blast hits to 9013 proteins in 1259 species: Archae - 0; Bacteria - 4823; Metazoa - 1003; Fungi - 192; Plants - 2095; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink).
Link
InterPro Scan - TAIR