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13-0313-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 581627 [Map]; Strand: c
      • AT4G01420.1 - [+] show detail - calcineurin B-like protein 5
        Distance: -109; Region: promoter
    Flanking Genome Sequence: 13-0313-1 - 3-prime edge 
    ATAGGCATCA ACGTAGGTGC AAGAAATTGT GGAATATAAA TCTATTTCTA 
    ACCGAACAAA TTCGAAAGTG GAAGGGTTTG TACATTGCCG GCTTAGGAAG 
    CTGGAGACAA ATGGTATAAT TTATATCGGA ATTTGATACT AGTTCTTTTT 
    CTATGAAACT TCATTTTCTT TCCAGAGTTC TTTAATTATA TTCTTTTTCT 
    ATGGTTTATA TTTTCTTGTT GATTCAAATT TTTTTCTTGT TACTTGATAT 
    TCAAAGCGGG ATGTCTATGC CCATTAGCCC AGTCCAATAA TATCCATTTC 
    GATATTGGAC AAATAGTGTC TATGTCCACT AAGGTCCATA TCCATTAACG 
    TTCATGCTCA TTAAAACTCA TGTCCAAATA GGCTGTCCAA TGGGCATAAC 
    ATAACCAAAT TTTAACACAA TAGTATTTGC TTCATATTTC AACCAAATTA 
    TCAAATCCAA AAGCAAATTT AAACAACAAA GTATTAAATA ATTTAAGTAT 
    TAAATCCAAA AGCAAATTTA AACACAATTC AAGTATTTAA CAAAGTATCA 
    AATCCAAAAA CAAATTAAAA GCAAATTTAA ACTTCTTCTT CTTCTCTCTC 
    GCCATCTTTG TCTTTATTAA AGAACTCAAT ATTATCACCT AAGTCCAACA 
    GAAAAAGAAG AACTCAATAT GCATTAAGAT CAAATTGATT GAAATATGAC 
    AAAAGAAAAA AAGTCAAAGC TC

AT4G01420.1

Model type
Protein coding
Short Description
calcineurin B-like protein 5
Curator Summary
Encodes calcineurin B-like protein 5 (CBL5). Overexpression confers tolerance to drought and salt stress.
Computational Description
calcineurin B-like protein 5 (CBL5); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to salt stress, response to water deprivation, N-terminal protein myristoylation, calcium-mediated signaling, response to osmotic stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, flower, leaf; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G24270.2); Has 5545 Blast hits to 5527 proteins in 657 species: Archae - 0; Bacteria - 7; Metazoa - 2787; Fungi - 925; Plants - 1302; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink).
Link
InterPro Scan - TAIR