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13-0317-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 397219 [Map]; Strand: c
      • AT2G01890.1 - [+] show detail - purple acid phosphatase 8
        Distance: 0; Region: intron6 (CDS)
      • AT2G01890.2 - [+] show detail - purple acid phosphatase 8
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 13-0317-1 - 3-prime edge
    GCNNGAGNNN CGCCGNGCAN GNTGANCAGT CCGGGNAANC GACNANGCCT 
    GCNNTNCTGN GTCNGCCTNN CTNTCAGNNN NANGAATNGN GTANTNAATN
    ANANAAACNT ANNATACTNA CCTGTNGACC GCTGCTTATG TGCTNCAAGC
    AAGGATCATG CCCTGNTTAT ATAGAGATCC ACTTCATTAG CCTAAATATA
    TCAAGAAAAC CAATTAAATT GTNTTTTTTT CAATTNTTGG TATTACATAA
    TTCAGTANTT TATAATATAG NAAAAATTAC CTCGAGGATA GGTAAAAGNN
    GTTTCTNAAG CTCTATGGTN TTTCCGNGGG GACCTGCACT TTTGATNGNG
    NGATGGCCTA CCANTATTTT CCATTTAGCC ATTGATTNTT GCAATGCCCN
    ATNNACATCC TATNTATCAT TAANTNTNGG TGCAANNATA NTNANTTTAT
    TNTTGANTAN TNTNGTAAAT CGNATACAGN GNNTTTAGNT ATGATGCCAA
    NTNAACNTAT TNCTANTTGT NNAAATAATT CNTGATGNAT CNNNACNTNG
    CTNNGGGNTA NANANTNNAA GNAATAANTN TTCCNGNNAN ANAAANGGGN
    AAAGNGANTT TTATNATNNG AGTNGATANN NNNTGNNGNN ANNNNNTANN
    NNGGGCANTN NGGAAGGNNN NANAANANNN ATNNNNGNNN CAGNATGTTG
    CCTCCNNGNA AAAACNNNNA NANTAGNGGA GANTAAAANN NANGGGCCNN
    NTNANGNGAA ANT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 397107 [Map]; Strand: c
      • AT2G01890.1 - [+] show detail - purple acid phosphatase 8
        Distance: 0; Region: exon7 (CDS)
      • AT2G01890.2 - [+] show detail - purple acid phosphatase 8
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 13-0317-1 - 5-prime edge
    GAGGTGGCTC CAAGGCGTGG AAAGGAGATG TGAATGATTG GAACCCACAA 
    GAGATGAGGT TTTACTATGA TGGACAAGGA TTCATGTCGG TTTACACATC
    CGAAGCCTGA ACTACNGTGT CGTTTTCTAT GATGGTCTTG GTCACCGTTT
    TGCATCGATG GAGCACTCTT AAGAATGGGG NTTATTCCGA TATCTAATCG
    ATGGNCAGAC AAAAAAGTAG TTAAGAGTTA CNACATAATT ATTTATNTTA
    ATTAGTCCAT TGGTTATTAT GTTGANATTT CATGNGAGGN AAANATTTTT
    TAATGNNGGG NGNTTATTTT TCNAANTANC AACCCNGGGN CCNGNGNNCN
    NCCCGCCCCC CNCCGNGNNN NNNNTNNGGN GGGGGGGGNG GNNTNNANAT
    TTTTTTAANA GGGGGGNCCC NNANNACCCC CCCCCCCTTA ANAGNNANNN
    NTA

AT2G01890.1

Model type
Protein coding
Short Description
purple acid phosphatase 8
Curator Summary
Encodes a purple acid phosphatase (PAP) belonging to the low molecular weight plant PAP group.
Computational Description
purple acid phosphatase 8 (PAP8); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01890.2

Model type
Protein coding
Short Description
purple acid phosphatase 8
Curator Summary
Encodes a purple acid phosphatase (PAP) belonging to the low molecular weight plant PAP group.
Computational Description
purple acid phosphatase 8 (PAP8); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR