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13-0328-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22609861 [Map]; Strand: w
      • AT3G61090.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: -39; Region: promoter
    Flanking Genome Sequence: 13-0328-1 - 5-prime edge 
    CTTACCAGCA TTTTCGCTTG TCAAAGAAGA CATGGTTTCG AGTGACCTAG 
    ACTGAGAGAG ACTTCTTCTG AACAAAGTTG ACAACATTGG GACAAAAGTT 
    ATTAATTGTT CCTCAACTAG AAAGGGTCAG TAATGGGCCT CTGGTTGGGC 
    TTTAAAATAA ATGGTCCCGG AATGGTTGCA TTCTGTACAA CGAAGTTAAT 
    GGGCTCTTTT GTGGGTGTTG TACTAGGGAC TTCTTATTTA CAAGTTGCTC 
    AAAATGNGAA TTACCANCCC CGGCCGNGGA CCANNCCTGC CCCTTAGGGN 
    GGNNNNTTNG GGNGNCCNTT TNNAACNNAN CCNNGGGGGG GGAAANNCCN 
    GGGCCCNTNG NGGGGGGGGN TTTTANCCCC CCCCNGGGGG GGNNNANANC 
    CCCNCCCCNT TANAGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22609745 [Map]; Strand: w
      • AT3G61090.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-0328-1 - 3-prime edge 
    CTGGNANNCT CTCGTTCTCT CTNTATCATG TNATTCTGTA ATGGATCTAT 
    TCAAATTGTA TTCTCTCGAT GCTGATTTGT AATGCATCTT CCGTTTTCGA 
    AAAACCTTGC TGACAGAGAC TAAGGTAGGC GTCTTCTGGG ACGTGGAGGA 
    ATGCCCAGTC CCTGATGGTG TGGAGCCATC TGTGGTTTGT GAGAATATCA 
    AACTTGCTCT TGAGAAAAAG GGTTATCGTC CTTGTAATGT CTCAATCAGA 
    GTTTATGGTG AGAGGACTAA TAAGTTCAAG GATGACTTTC TCCTCGCTGA 
    TATCATGTTC TTACCCGCAG GTAAAGAAAC ACAGTACTTG TCTTTTTCTT 
    TTACTTTATG TCCGTATCTT ANAGATCTCT GTTGATGGTT TCAGGAGATG 
    AAGGAGCGAG ATTTATGAGG ATGTGTAATG ATTTCTTTTG CTGGGGAAAT 
    GACAATCGTA AATCAACTTT GATGGTAATG TCACGAGACA GCACTGAGTT 
    CGCCTCTTCT TTCGTAATGT ACAAAAACTT GAATTTCAAC ATTCTCGTAN 
    CACAGCCAGA AAACGTANAC AGAAAATGTC CTGTCTGCAN AAAGCCTTTG 
    GAAATGATCA TCACTGACNA ATGGGTTTGG GAAAGCCTCT CTGCTGGAGG 
    ANACCCTCTN CCCNAACCCC NNAAAAACCA NACCTTANAA CTNNNGNNAT 
    AACTATGCNG NNTTT

AT3G61090.1

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G61100.1); Has 176 Blast hits to 170 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR