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13-0354-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3729304 [Map]; Strand: c
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-0354-1 - 3-prime edge
    GTTAGTTGTT TGAAATTGGT ATGGAGGATA CTATCCAAAT CAGAGTCTTT 
    GTGGGTTACT TGGATATGGA AATATCTCAT ACGAAAAGGG TCATTCTGGT
    TGGTTAAAGA GAGCTCCAAT ATGGGTTCTT GGATGTGGAA AAAGCTATTC
    AAATATAGAG ATTGTGCCAA GACTATGCAC AAGGTGGAAA TTAAGAGTGG
    CAGCTCAACC TCTTTTTGGT TTGATAATTG GTCACAGTTG GGCAGATTGA
    TCGATATAAC AGGTCCTCGT GGAGTCATTG ATTTGGGTAT TCCTCTCGAT
    GCAATGGTTG AAACAGCTCT ACATCCTCGA CGGCGTCGAA AGCATCGAGT
    TGACGTTCTC AACAGAATTG AAGCTGAGAT ACATACTACT CGCCAACGGA
    TCAGAATAAA TGAGAAGGAC ATCTCGATGT GGAGATTTGT GGGAGATAAG
    TTTAAGACAA CTTTCTCAAC AAAGTTCACT TGGAATAATA TTAGAGGCAC
    ACATCCAACA GTGGTTTGGT CGAAAGGTGT ATGGTTCTCT TACTCTACGC
    CCAAATACTC ATTCTTAACG TGGCTTCCAA TTCATAATAA ATTAGCAACA
    GGGGATCGAA TCAAGAAGTG GAATACGGGG CAGCATGTAC ACTGTGTCTT
    ATGTACGAAC ACGGAGGAGA CGAGAGATCA TTTGNTCTTC TCCTGCCATA
    CTCCTCAACG ATCTGGGANA ACTTTGGC

AT1G11150.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 30% identity and 3.2e-59 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus}
Link
InterPro Scan - TAIR