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13-0375-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3057832 [Map]; Strand: w
      • AT1G09470.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: coty...
        Distance: -858; Region: promoter
      • AT1G09470.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis t...
        Distance: -389; Region: promoter
      • AT1G09480.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -143; Region: promoter
    Flanking Genome Sequence: 13-0375-1 - 5-prime edge 
    GGTGNAGCCA TATNAAACCG NTGGAGATCC GATCGAATAC AACTACGAAA 
    GATATTAAAA AGCT

AT1G09470.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26770.1); Has 55019 Blast hits to 30094 proteins in 2088 species: Archae - 730; Bacteria - 6553; Metazoa - 28961; Fungi - 4800; Plants - 2559; Viruses - 111; Other Eukaryotes - 11305 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09470.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26770.1).
Link
InterPro Scan - TAIR

AT1G09480.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1); Has 11337 Blast hits to 11295 proteins in 1830 species: Archae - 188; Bacteria - 4702; Metazoa - 514; Fungi - 973; Plants - 2502; Viruses - 52; Other Eukaryotes - 2406 (source: NCBI BLink).
Link
InterPro Scan - TAIR