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13-0397-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4654945 [Map]; Strand: c
      • AT1G13600.1 - [+] show detail - basic leucine-zipper 58
        Distance: -3476; Region: intergenic
      • AT1G13605.1 - [+] show detail - LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 24...
        Distance: -3593; Region: intergenic
    Flanking Genome Sequence: 13-0397-1 - 3-prime edge 
    CAAAGCAGCT CCATATTTAT ATAGTTTCCC TATAAATATT TGATTGGACT 
    AAAGAGGATA AGCT

AT1G13600.1

Model type
Protein coding
Short Description
basic leucine-zipper 58
Computational Description
basic leucine-zipper 58 (bZIP58); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 48 (TAIR:AT2G04038.1); Has 2046 Blast hits to 2038 proteins in 142 species: Archae - 0; Bacteria - 6; Metazoa - 51; Fungi - 55; Plants - 1834; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13605.1

Model type
Protein coding
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR