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13-0404-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2716805 [Map]; Strand: c
      • AT1G08580.1 - [+] show detail - unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; ...
        Distance: -401; Region: promoter
    Flanking Genome Sequence: 13-0404-1 - 5-prime edge 
    CCCATATGGG ACTTTTGTCA TNGNCAACAT TANAAANNAT GNAATACCNA 
    ATGGAATAAC AACNATANAT NCTATGTGTG AATGATAATG CATGCNTTAN 
    TTATTAATTA TATGTATATA TACTAATGAT GAGATCATAA TTTCGATAGT 
    TTAGAGAGAA GATGAGGCTG GAGAGCATGT GCTAAGAGCT TTCCATTAAC 
    CATCTAAACA CTTAAATCTA ATTAGTTTAG CCACATTTTG TTTTTTTGTA 
    ATTAAATTTC ACATTTTTTT TATTTAAAGA ANAAGTTCAN ATTTCAATAA 
    TTTGACGTCT TTCAATTTGA GCCGAATCAA ACCGAACCGG ATTAATTGTT 
    ATTTTTCTCA AGCAGCAACG ATAAAAAAGA TATCTAAAAG GCCCAAATAA 
    NAAATTGANA AAAGGCCCAA ATAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2716919 [Map]; Strand: c
      • AT1G08580.1 - [+] show detail - unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; ...
        Distance: -515; Region: promoter
    Flanking Genome Sequence: 13-0404-1 - 3-prime edge 
    CCTNTGAGGN GCCNGTGNAG TATNANAGGG CGTGTTATAA NACGACGNTT 
    AGANCAATTA TTTTTTCCTT CTTATGAATA TGATAATAGA GGATAAATTT 
    GGAAAGGACA ACAGAACCTT TAACTTAGAG GTGCTGTCCA TATCTACCTT 
    GCAAACCTAC AACAATTAAA TGTGTTGGAC GAACCGATAG TCGATACTCG 
    ATAGTCGATA ATGGATATAT ATGCTCGAGG TACGTAAAAT TTAGATGTTA 
    ATCCGCAAGA ATATATAGAG TTGTGCTAGA TGTATTAATT AAGATATCGA 
    TCTCCAAAAA GTCTATACAC TCACGAGAAT ATGTTTCATA TAGTTTTTGG 
    GATCAATTAT GGTGATTCTT CTAATGTGAA CATGATTCAT TCATTTAATG 
    GGTATATCCG ATCGAATATA TATGTTTTAG ATTTTAAGAA CAAAATAAAA 
    ATGATAGATG GCCCTTTTCG ATGGTTCTAA ACTTTATTTT GATATCGNGA 
    GAGCACTTAA TGCTACTTTG TTCTTCACGC AATCAGCATG CATATTTACT 
    CACAAGTTGC AACCACACGA ATATAAACAA ATNCGGTTAC GGACTTAGGG 
    CTACATATTC AGTTACGTCT NGATGTCATA TGCATAGTTT ATTTGAAGCT 
    CCTTGCCTAA AAATGCNNTA AATATGCAAA CTTTATGCA

AT1G08580.1

Model type
Protein coding
Computational Description
unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR