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13-0446-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19619186 [Map]; Strand: w
      • AT1G52680.1 - [+] show detail - late embryogenesis abundant protein-related / LEA protein-related
        Distance: -165; Region: promoter
      • AT1G52690.1 - [+] show detail - Late embryogenesis abundant protein (LEA) family protein
        Distance: -559; Region: promoter
      • AT1G52690.2 - [+] show detail - Late embryogenesis abundant protein (LEA) family protein
        Distance: -559; Region: promoter
    Flanking Genome Sequence: 13-0446-1 - 5-prime edge 
    GNTAATAACA TACCATTGAC GATTGACATG GCTAAATTTT TCTGTGGAGG 
    TGAATAGTTT GAGGACTTAT TACCCTAACG TTGCCTTGGT TAAGAAGTGA 
    AGTAGGATGA CCGGCAATAG GAAGATC

AT1G52680.1

Model type
Protein coding
Short Description
late embryogenesis abundant protein-related / LEA protein-related
Computational Description
late embryogenesis abundant protein-related / LEA protein-related; Has 75 Blast hits to 75 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G52690.1

Model type
Protein coding
Short Description
Late embryogenesis abundant protein (LEA) family protein
Computational Description
Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT3G15670.1); Has 2929 Blast hits to 1441 proteins in 420 species: Archae - 10; Bacteria - 766; Metazoa - 298; Fungi - 136; Plants - 1347; Viruses - 16; Other Eukaryotes - 356 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G52690.2

Model type
Protein coding
Short Description
Late embryogenesis abundant protein (LEA) family protein
Computational Description
Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT3G15670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR