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13-0461-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3254197 [Map]; Strand: c
      • AT5G10340.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0461-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    CTCCTTGGGA GGACAAGTTG TACTTCGTTT GCAATACTAG CTGTGATGGT
    CTGATATGCC TCTTCAGTTT CTATGAACTG CCGAGTATTG TCGTCAATCC
    CACCACTCGA TGGCATCGAA CTTTCCCTAA ATGCAACTAT CAACTAGTCG
    CTGCCGACAA GGGTGAGAGA CACGAGTGCT TTAAAGTCGC ATGCCCTACT
    CCTGGATTTG GCAAAGACAA AATCAGTGGC ACTTACAAGC CAGTTTGGTT
    ATATAATTCC GCTGAGTTAG ACCTAAATGA CAAGCCTACT ACTTGTGAAG
    TTTTCGATTT TGCCACCAAC GCTTGGAGGT ACGTTTTCCC CGCGTCCCCT
    CATCTGATTC TTCACACCCA AGATCCTGTT TATGTAGACG GGTCACTTCA
    TTGGTTCACT GCCTTGTCAC ACGAGGGCGA AACCATGGTT TTGTCTTTGG
    ATCTTCACTC CGAAACGTTC CAAGTCATCT CTAAAGCTCC CTTTCTCAAT
    GTCTCTGATG AATATTATAT CGTCATGTGC AACCTCGGTG ATCGTTTGTG
    CGTATCCGAG CAAAAGTGGC CCAACCAAGT CATATGGTCG TTGGAATGAT
    TCANACCACA AGACATGGAA GCAAATATAT TCCATAGACC TCATTATCAC
    CTCTTCTTTT GTTCTTTNGG GCCATATNTN GCATTCACCC CCANTTANNA
    GTTTTGGGAC NAG

AT5G10340.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR