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Mutant Lines
13-0470-1

13-0470-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 94955 [Map]; Strand: c
- AT2G01130.1 - [+] show detail - DEA(D/H)-box RNA helicase family protein
  Distance: -295; Region: promoter
- AT2G01140.1 - [+] show detail - Aldolase superfamily protein
  Distance: 0; Region: exon4 (3UTR)

GTCAAGGGTT ACACCTACTG ATTTGTTAAT TTCAGAGATC GTAATAAGGA 
TTAAGGACCA TTGTTGTCTT TTGTTTTTTT TTNCCCTTTT TNGTTTNGNC 
TNTNAAAAAA AAAAACAGNC CCAANTCNCA ANCATNTNAT NTNTGTNTGN 
NACCANCGNN AAANCATCCT NTNAAATCNA TNTTNCCTNT NATAAAAACN 
GATNNCNGTT NNACNGCAAA NCCAAATNGG GNAATTNTTN TTTNAAGTTA 
NCAAAATTTT NGNNGGGCAA TTAGGTAAAA TNGGCNTANT NNCAAGTNCA 
GNGTTAAAAA AACCANNGGA AATNACCACC CCGGNCCGTN AACCNCCCNN 
GCCCTNNA

3 prime edge [+] show sequence

Chromosome: 2; Position: 95071 [Map]; Strand: c
- AT2G01130.1 - [+] show detail - DEA(D/H)-box RNA helicase family protein
  Distance: -411; Region: promoter
- AT2G01140.1 - [+] show detail - Aldolase superfamily protein
  Distance: 0; Region: exon4 (CDS)

CCCTTGACAA ACATTCCTTT CTTGGCATCC TCGTTCTCTC CCTCGGCTGA 
GTATTTGCCG AGCTGGGCCA GTGAGTTGGC CTTTGCCCTC ACCAACAGTG 
CCTTCTGCGA GGCCTCAATC TTCTCCGGCT TGCCTTGCCA TGTTCTGAGC 
ACNGGAGTTC TGCAGGGCAC GTGCGTATGA GAAGGACACA TGCCATGGGT 
TTGGGCTCTG GTTCATGGCG TTCAGGTTCA GTGTGGCCTC TGCCTCTGAT 
TGTCCTCCTG ACAGAAACAT GATCCCTGGG ACAGCCGGAG GAACCCTCCT 
TTTCAGCATG GTGAGCGTGA AATCTGCAAC GGTCTCGGGA GAGGCCTTGT 
TCTTGTGCTC AGCGCCTGGG GTGACCATGC TCGGCTTCAA CAGAATGCCC 
TCAAACATGA CGTTGTTCTG TGCCAAGTAG AAGAACACCT CTGACCACAC 
TTTCTCTGCC ACCTCCAGAG TCCTCTCTAT TGGGTGGTCC CCGTCCAGAA 
GGATCTCTGG CTCCACAATG GGGACAAGAC CATTATCCTG AGAGATGGCT 
GCATAGCGAG CCAGCCCCCA CGCAGCTTCC TTCACAGCCA GTGCTGAAGG 
ACCGCAGGGA ACACTCACCA CTGTCCTNCT AGACAAACAC ACACATTCAT 
ATATTCCAAA GAGTCAACAT CAAACCTAGG AANAGCATTT TTCACATCAA 
CCCAAAGAGG TAATACCATA TGTAAAA

AT2G01130.1

Model type: Protein coding
Short Description: DEA(D/H)-box RNA helicase family protein
Computational Description: DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01140.1

Model type: Protein coding
Short Description: Aldolase superfamily protein
Computational Description: Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link: InterPro Scan - TAIR