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13-0483-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 39403 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0483-1 - 5-prime edge 
    CTCAAGCTGG TGTCAGGTAC GCCATGGAAA ATCCTAGCTC TTATGTTCAC 
    AGTAACATCG CTGGCTTCGT CAATCTCCTT GAGGTTTGCA AATCTGCCAA 
    TCCCCAACCC GCCATTGTCT GGGCTTCCTC TAGCTCTGTC TACGGGCTCA 
    ACACTAAGGT CCCCTTCTCC GAGAAAGACA GAACTGACCA ACCAGCTAGT 
    CTCTATGCTG CTACTAAGAA GGCTGGTGAA GAGATTGCTC ACACTTACAA 
    TCACATCTAT GGACTCTCTC TTACTGGCTT GAGGTTTTTC ACCGTCTATG 
    GTCCTTGGGG AAGGCCTGAC ATGGCCTATT TCTTCTTCAC CAGAGACATT 
    CTCAAAGGGA AAGCCATTTC AATCTTTGAG GGGGTCAACC ATGGAACCGT 
    GGCTAGGGAC TTCACTTACA TTGATGACAT TGTCAAGGGG TGTTTAGGGG 
    CTTTGGACAC GGCTGANAAG AGCACTGGTA GTGGTGGTAA GAAGCGCGGT 
    GCGGCNTCAG TTACGGGTTT TCAATCTCGG CAACACTTCG CCCGTTCCAG 
    TGACTGATCT TGTCACCATT CTTGAAAGAC TTCTNAAAGT CAAGGCCAAG 
    AAGAACATTA TGAAGTTGCC GAGGAACGGG GATGTGCANT TCACTCATGC 
    TAATATNAGT TCTTGCNCAN AAAGAAGCTC GGNTACAAAC CACCACCGAT 
    CTTAAAC

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR