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13-0496-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30411102 [Map]; Strand: w
      • AT1G80940.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: intron1 (CDS)
      • AT1G80940.2 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-0496-1 - 5-prime edge
    GTCTCTACCA CCAAGATCGC GTGGAAATCA AGAAAAAGAT CAGGTTTTTT 
    CCACTGTTTC TTGTTTTCTC AGACCATTAA AGATTCTAGA CCTTTATTAG
    CCTACCCTTT CTATTTCTGG TCTGAAAGAT TTGGAATTTA TTTAAGCAGA
    CTGAAATCAT CAATTGTTTT AGCTCTATGT GAACTATTTC CTCGAGATCT
    AGACATGGAG CTTTAGTCTT CTTCTCTCTG TCTTTTGTAA CTTTCGTTTT
    GCTCTGATCC GTTTGCATGT GATTTTGGAA CTCAAAGCAT TAACTATTTT
    GATCGCAGCA TTGTTGAACC TAGACAAAGC ACCGGAGGCT GTTACGGAGG
    TCACACCAGA GAAGAACGAG ATAACAGCAA TGGATACCGA GAAAGTTGGG
    GAACCAATGA CCACAACTCC TCTTTTGTNC NAAAAAAAGA AAACTCTNTT
    NNAGCCCCTT GAACCCCTTN CNAACTTNNN CGGNAAGCNA CCNCNGNGGN
    NGNTNNNTTN TNGNCCCCCC NNNNNTNNNN NNNNNGNNNN NNNC
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30410986 [Map]; Strand: w
      • AT1G80940.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon1 (CDS)
      • AT1G80940.2 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0496-1 - 3-prime edge
    GTAGAGACAG GGAAAAAACC TCCGACAAAC CCATCACTCA CTGTCTTCAT 
    GTCTTTCTCA AATCCAACCC CTTTCTCCAT CTAAATCTGA AAATTTCCCA
    GAAGATACAC GAATTTTGAG AAAGAGAAGA AGAAGAAGAA GATAACCGTA
    CAAGGAATCG AATT

AT1G80940.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80940.2

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR