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13-0501-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3604997 [Map]; Strand: c
      • AT1G10820.1 - [+] show detail - Protein of unknown function (DUF3755)
        Distance: 0; Region: exon1 (5UTR)
      • AT1G10820.2 - [+] show detail - Protein of unknown function (DUF3755)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-0501-1 - 5-prime edge 
    TGACTGCAAG AAACAAACAA CACAGCCAAT TACTACTAAA CAAACACACT 
    CTCTCTTTCA TTCTTTCTNT CTCTCTCTCT CTCGATTNTC TCCCATNGGA 
    GTTCGCAANT ANCGTGCCAC TCTCTGATCG ATCTTCTTCT CACATCACAT 
    CCTTTATAAT CTTCAGTTNT ACTGCTCGGA GGTGTNTGCT TGCGTTCTCT 
    CTTGTCGGNC ACATCCCTAA TTACCATCAC TGCCCCTGAT TAAAGTTNTA 
    CTCTATCTTC TTTGNNGATG CCAAATCTGA GGNGGGTTTC TCATCTTTTT 
    ATTCTTTCAG CTGTGTTNTG TTNCATNTAT TTGTTTNTGG ATTTGCTAAA 
    ACCCTAAATT NGATATCTNT GGGGGCATCA TCGTAGCTCA AATCAGCTTC 
    AATTATCAAA TCTCCACGAN TGATTCCAAT GGATAATCAC TGCTTGCCAA 
    GTACTAGCAC CACCGGGTCT TGTATTCCCG ACCAATTACN GGGGTTANTG 
    CGATTAACGC TNNCTCCGGT TTTCACCCAA CTGTGGATGC TTCGGGTTCA 
    GNGGCTGCAN GAGTCAAACA AAAAACTGCT TTGGNTATNG ATGGGCCCGN 
    TGAGGAACAA TATGTTTTNG AAAACCGGCC TTGCAAAANA GGNATCNTCC 
    GTTCCGCTTA ATTCTTNNGA TATTCCCATT NNCTTATTTT TNAANACCCA 
    AAAGGGGNTT TGGNAAATTC NAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3605064 [Map]; Strand: c
      • AT1G10820.1 - [+] show detail - Protein of unknown function (DUF3755)
        Distance: 0; Region: exon1 (5UTR)
      • AT1G10820.2 - [+] show detail - Protein of unknown function (DUF3755)
        Distance: -40; Region: promoter
    Flanking Genome Sequence: 13-0501-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    GCAGAACCTC TTTGTTGTAT TCATACTCCT TTGCTTTCTT TTCTTTTGGC 
    CTCTTTTTTT TTTTTTTTTT TTTTTTNGNC CCCNAANNCN TTTTTTNNAA 
    ANTTTTTNGG GGGAAAAAAA NTTTNAAAAN NNNAAAAAAA AAANGGGGGG 
    GGNANNTTNN AANNNNAAAA AAAAAAAAAA NNCCCCCCNT NAAANTTTTT 
    TTNAAANNAA AAAAAAAAAN GGGGNNAAAA NNNNAAAAAA AANNNAAAAA 
    GGGGGGGGNN AANGGGGGNN NNNNAAAAAA NNAAAAAAAA AAAAAAANTT 
    TTNCCCGGGG GGGCNNAANN CCAAAAAAAA AAAAAANNCC NNNTTNNNAA 
    AAANGGGGGG GGGGGAAAAA NNCCCCCNNN CNNNGGGGGG GGNNNTTTNN 
    NNAAAAAANN NTNCCCCNAA ANNTTTTTT

AT1G10820.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3755)
Computational Description
Protein of unknown function (DUF3755); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G60670.2); Has 155 Blast hits to 155 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10820.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3755)
Computational Description
Protein of unknown function (DUF3755); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G60670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR